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Summary Anatomy Item Literature (2128) Expression Attributions Wiki
XB-ANAT-3747

Papers associated with cytoplasm

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Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders., Kaiyrzhanov R., Brain. April 4, 2024; 147 (4): 1436-1456.                            


Brain enlargement with rostral bias in larvae from a spontaneously occurring female variant line of Xenopus; role of aberrant embryonic Wnt/β-catenin signaling., Hongo I., Cells Dev. April 3, 2024; 203918.                            


Viscosity-dependent control of protein synthesis and degradation., Chen Y., Nat Commun. March 8, 2024; 15 (1): 2149.                  


The RhoGEF Trio is transported by microtubules and affects microtubule stability in migrating neural crest cells., Gossen S., Cells Dev. March 1, 2024; 177 203899.                                    


Evidence for widespread cytoplasmic structuring into mesoscale condensates., Keber FC., Nat Cell Biol. March 1, 2024; 26 (3): 346-352.


Caged Dexamethasone to Photo-control the Development of Embryos through Activation of the Glucocorticoid Receptor., Mandal M., Chemistry. February 13, 2024; e202400579.                            


The early dorsal signal in vertebrate embryos requires endolysosomal membrane trafficking., Azbazdar Y., Bioessays. January 1, 2024; 46 (1): e2300179.                            


Preparation of Xenopus borealis and Xenopus tropicalis Egg Extracts for Comparative Cell Biology and Evolutionary Studies., Kitaoka M., Methods Mol Biol. January 1, 2024; 2740 169-185.


Measuring Molecular Diffusion in Self-Organizing Xenopus Extracts by Fluorescence Correlation Spectroscopy., Huang WYC., Methods Mol Biol. January 1, 2024; 2740 107-115.


A maternal dorsoventral prepattern revealed by an asymmetric distribution of ventralizing molecules before fertilization in Xenopus laevis., Castro Colabianchi AM., Front Cell Dev Biol. January 1, 2024; 12 1365705.                


Solubility phase transition of maternal RNAs during vertebrate oocyte-to-embryo transition., Hwang H., Dev Cell. December 4, 2023; 58 (23): 2776-2788.e5.                          


β-Catenin and SOX2 Interaction Regulate Visual Experience-Dependent Cell Homeostasis in the Developing Xenopus Thalamus., Gao J., Int J Mol Sci. September 2, 2023; 24 (17):                 


Phase transition of maternal RNAs during vertebrate oocyte-to-embryo transition., Hwang H., bioRxiv. May 11, 2023;


Molecular functions of the double-sided and inverted ubiquitin-interacting motif found in Xenopus tropicalis cryptochrome 6., Okano K., Dev Growth Differ. May 1, 2023;               


Protein homeostasis from diffusion-dependent control of protein synthesis and degradation., Chen Y., bioRxiv. April 28, 2023;


Mitotic chromosomes scale to nuclear-cytoplasmic ratio and cell size in Xenopus., Zhou CY., Elife. April 25, 2023; 12                                                 


A single-cell, time-resolved profiling of Xenopus mucociliary epithelium reveals nonhierarchical model of development., Lee J., Sci Adv. April 7, 2023; 9 (14): eadd5745.                                                          


OTUD3: A Lys6 and Lys63 specific deubiquitinase in early vertebrate development., Job F., Biochim Biophys Acta Gene Regul Mech. March 1, 2023; 1866 (1): 194901.                


The cohesin modifier ESCO2 is stable during DNA replication., Jevitt AM., Chromosome Res. January 28, 2023; 31 (1): 6.        


Neuronal membrane proteasomes regulate neuronal circuit activity in vivo and are required for learning-induced behavioral plasticity., He HY., Proc Natl Acad Sci U S A. January 17, 2023; 120 (3): e2216537120.                    


Seawater fish use an electrogenic boric acid transporter, Slc4a11A, for boric acid excretion by the kidney., Kato A., J Biol Chem. January 1, 2023; 299 (1): 102740.                    


Biochemical evidence that the whole compartment activity behavior of GAPDH differs between the cytoplasm and nucleus., Tang HS., PLoS One. January 1, 2023; 18 (8): e0290892.                                    


The conserved centrosomin motif, γTuNA, forms a dimer that directly activates microtubule nucleation by the γ-tubulin ring complex (γTuRC)., Rale MJ., Elife. December 14, 2022; 11                               


Comparative analysis of vertebrates reveals that mouse primordial oocytes do not contain a Balbiani body., Dhandapani L., J Cell Sci. December 1, 2022; 135 (1):                     


Inositol 1, 4, 5-trisphosphate receptor is required for spindle assembly in Xenopus oocytes., Li R., Mol Biol Cell. December 1, 2022; 33 (14): br27.          


Differential contribution of nuclear size scaling mechanisms between Xenopus species., Heijo H., Dev Growth Differ. December 1, 2022; 64 (9): 501-507.      


Nascent transcriptome reveals orchestration of zygotic genome activation in early embryogenesis., Chen H., Curr Biol. October 10, 2022; 32 (19): 4314-4324.e7.                        


Differential nuclear import sets the timing of protein access to the embryonic genome., Nguyen T., Nat Commun. October 6, 2022; 13 (1): 5887.                                  


Cytoplasmic organization promotes protein diffusion in Xenopus extracts., Huang WYC., Nat Commun. September 23, 2022; 13 (1): 5599.                              


GJA1 depletion causes ciliary defects by affecting Rab11 trafficking to the ciliary base., Jang DG., Elife. August 25, 2022; 11                                       


The p97 segregase cofactor Ubxn7 facilitates replisome disassembly during S-phase., Tarcan Z., J Biol Chem. August 1, 2022; 298 (8): 102234.                          


Phosphate position is key in mediating transmembrane ion channel TMEM16A-phosphatidylinositol 4,5-bisphosphate interaction., Tembo M., J Biol Chem. August 1, 2022; 298 (8): 102264.              


Multivalent interactions with RNA drive recruitment and dynamics in biomolecular condensates in Xenopus oocytes., Cabral SE., iScience. July 21, 2022; 25 (8): 104811.


Cell cortex regulation by the planar cell polarity protein Prickle1., Huang Y., J Cell Biol. July 4, 2022; 221 (7):                           


The Cytoskeletal Protein Zyxin Inhibits Retinoic Acid Signaling by Destabilizing the Maternal mRNA of the RXRγ Nuclear Receptor., Parshina EA., Int J Mol Sci. May 17, 2022; 23 (10):                 


The molecular identity of the characean OH- transporter: a candidate related to the SLC4 family of animal pH regulators., Quade BN., Protoplasma. May 1, 2022; 259 (3): 615-626.


Essential roles of YAP-TEAD complex in adult stem cell development during thyroid hormone-induced intestinal remodeling of Xenopus laevis., Hasebe T., Cell Tissue Res. May 1, 2022; 388 (2): 313-329.


Unwinding the roles of RNA helicase MOV10., Nawaz A., Wiley Interdiscip Rev RNA. March 1, 2022; 13 (2): e1682.


In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density., Jin M., Proc Natl Acad Sci U S A. February 8, 2022; 119 (6):


Proteomic screen reveals diverse protein transport between connected neurons in the visual system., Schiapparelli LM., Cell Rep. January 25, 2022; 38 (4): 110287.                                  


DNA-induced spatial entrapment of general transcription machinery can stabilize gene expression in a nondividing cell., Javed K., Proc Natl Acad Sci U S A. January 25, 2022; 119 (4):                       


Visualizing Nuclear Pore Complexes in Xenopus Egg Extracts., Mishra S., Methods Mol Biol. January 1, 2022; 2502 395-405.


Epigenetic regulation of GABAergic differentiation in the developing brain., Gao J., Front Cell Neurosci. January 1, 2022; 16 988732.            


Eya1 protein distribution during embryonic development of Xenopus laevis., Almasoudi SH., Gene Expr Patterns. December 1, 2021; 42 119213.                                        


L-bodies are RNA-protein condensates driving RNA localization in Xenopus oocytes., Neil CR., Mol Biol Cell. December 1, 2021; 32 (22): ar37.                        


A novel I551F variant of the Na+/HCO3- cotransporter NBCe1-A shows reduced cell surface expression, resulting in diminished transport activity., Yamazaki O., Am J Physiol Renal Physiol. December 1, 2021; 321 (6): F771-F784.


A missense mutation converts the Na+,K+-ATPase into an ion channel and causes therapy-resistant epilepsy., Ygberg S., J Biol Chem. December 1, 2021; 297 (6): 101355.  


New Findings on LMO7 Transcripts, Proteins and Regulatory Regions in Human and Vertebrate Model Organisms and the Intracellular Distribution in Skeletal Muscle Cells., Gomes G., Int J Mol Sci. November 28, 2021; 22 (23):                           


Stable lariats bearing a snoRNA (slb-snoRNA) in eukaryotic cells: A level of regulation for guide RNAs., Talross GJS., Proc Natl Acad Sci U S A. November 9, 2021; 118 (45):


The DNA-to-cytoplasm ratio broadly activates zygotic gene expression in Xenopus., Jukam D., Curr Biol. October 11, 2021; 31 (19): 4269-4281.e8.                          

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