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Summary Stage Literature (1477) Attributions Wiki
XB-STAGE-5

Papers associated with blastula stage

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Oocyte Host-Transfer and Maternal mRNA Depletion Experiments in Xenopus., Houston DW., Cold Spring Harb Protoc. October 1, 2018; 2018 (10):


Gap junction protein Connexin-43 is a direct transcriptional regulator of N-cadherin in vivo., Kotini M, Barriga EH, Leslie J, Gentzel M, Rauschenberger V, Schambony A, Mayor R., Nat Commun. September 21, 2018; 9 (1): 3846.                    

Serine Threonine Kinase Receptor-Associated Protein Deficiency Impairs Mouse Embryonic Stem Cells Lineage Commitment Through CYP26A1-Mediated Retinoic Acid Homeostasis., Jin L, Chang C, Pawlik KM, Datta A, Johnson LM, Vu T, Napoli JL, Datta PK., Stem Cells. September 1, 2018; 36 (9): 1368-1379.                      

Histone deacetylase activity has an essential role in establishing and maintaining the vertebrate neural crest., Rao A, LaBonne C., Development. August 8, 2018; 145 (15):                           

The age-regulated zinc finger factor ZNF367 is a new modulator of neuroblast proliferation during embryonic neurogenesis., Naef V, Monticelli S, Corsinovi D, Mazzetto MT, Cellerino A, Ori M., Sci Rep. August 7, 2018; 8 (1): 11836.                      

Dkk2 promotes neural crest specification by activating Wnt/β-catenin signaling in a GSK3β independent manner., Devotta A, Hong CS, Saint-Jeannet JP., Elife. July 23, 2018; 7                             

Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center., Castro Colabianchi AM, Revinski DR, Encinas PI, Baez MV, Monti RJ, Rodríguez Abinal M, Kodjabachian L, Franchini LF, López SL., Development. July 17, 2018; 145 (14):                           

Tbx2 is required for the suppression of mesendoderm during early Xenopus development., Teegala S, Chauhan R, Lei E, Weinstein DC., Dev Dyn. July 1, 2018; 247 (7): 903-913.                

The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution., Briggs JA, Weinreb C, Wagner DE, Megason S, Peshkin L, Kirschner MW, Klein AM., Science. June 1, 2018; 360 (6392):       

Asymmetric distribution of biomolecules of maternal origin in the Xenopus laevis egg and their impact on the developmental plan., Sindelka R, Abaffy P, Qu Y, Tomankova S, Sidova M, Naraine R, Kolar M, Peuchen E, Sun L, Dovichi N, Kubista M., Sci Rep. May 29, 2018; 8 (1): 8315.                

Embryonic regeneration by relocalization of the Spemann organizer during twinning in Xenopus., Moriyama Y, De Robertis EM., Proc Natl Acad Sci U S A. May 22, 2018; 115 (21): E4815-E4822.              

Mechanical Strain Determines Cilia Length, Motility, and Planar Position in the Left-Right Organizer., Chien YH, Srinivasan S, Keller R, Kintner C., Dev Cell. May 7, 2018; 45 (3): 316-330.e4.              

Pitx1 regulates cement gland development in Xenopus laevis through activation of transcriptional targets and inhibition of BMP signaling., Jin Y, Weinstein DC., Dev Biol. May 1, 2018; 437 (1): 41-49.          

An Early Function of Polycystin-2 for Left-Right Organizer Induction in Xenopus., Vick P, Kreis J, Schneider I, Tingler M, Getwan M, Thumberger T, Beyer T, Schweickert A, Blum M., iScience. April 27, 2018; 2 76-85.                                        

The skeletal ontogeny of Astatotilapia burtoni - a direct-developing model system for the evolution and development of the teleost body plan., Woltering JM, Holzem M, Schneider RF, Nanos V, Meyer A., BMC Dev Biol. April 3, 2018; 18 (1): 8.                              

Coordinated regulation of the dorsal-ventral and anterior-posterior patterning of Xenopus embryos by the BTB/POZ zinc finger protein Zbtb14., Takebayashi-Suzuki K, Konishi H, Miyamoto T, Nagata T, Uchida M, Suzuki A., Dev Growth Differ. April 1, 2018; 60 (3): 158-173.          

Phosphorylation states change Otx2 activity for cell proliferation and patterning in the Xenopus embryo., Satou Y, Minami K, Hosono E, Okada H, Yasuoka Y, Shibano T, Tanaka T, Taira M., Development. March 12, 2018; 145 (5):                             

A NuRD Complex from Xenopus laevis Eggs Is Essential for DNA Replication during Early Embryogenesis., Christov CP, Dingwell KS, Skehel M, Wilkes HS, Sale JE, Smith JC, Krude T., Cell Rep. February 27, 2018; 22 (9): 2265-2278.                        

Embryonic lethality is not sufficient to explain hourglass-like conservation of vertebrate embryos., Uchida Y, Uesaka M, Yamamoto T, Takeda H, Irie N., Evodevo. January 31, 2018; 9 7.    

RAPGEF5 Regulates Nuclear Translocation of β-Catenin., Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S, Liu KJ, Liu KJ, Khokha MK., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.                                                

FGF mediated MAPK and PI3K/Akt Signals make distinct contributions to pluripotency and the establishment of Neural Crest., Geary L, LaBonne C., Elife. January 19, 2018; 7                     

microRNAs associated with early neural crest development in Xenopus laevis., Ward NJ, Green D, Higgins J, Dalmay T, Münsterberg A, Moxon S, Wheeler GN., BMC Genomics. January 18, 2018; 19 (1): 59.              

Gene expression of the two developmentally regulated dermatan sulfate epimerases in the Xenopus embryo., Gouignard N, Schön T, Holmgren C, Strate I, Taşöz E, Wetzel F, Maccarana M, Pera EM., PLoS One. January 18, 2018; 13 (1): e0191751.                                                          

Anosmin-1 is essential for neural crest and cranial placodes formation in Xenopus., Bae CJ, Hong CS, Saint-Jeannet JP., Biochem Biophys Res Commun. January 15, 2018; 495 (3): 2257-2263.        

Reference gene identification and validation for quantitative real-time PCR studies in developing Xenopus laevis., Mughal BB, Leemans M, Spirhanzlova P, Demeneix B, Fini JB., Sci Rep. January 11, 2018; 8 (1): 496.            

Acetaldehyde inhibits retinoic acid biosynthesis to mediate alcohol teratogenicity., Shabtai Y, Bendelac L, Jubran H, Hirschberg J, Fainsod A., Sci Rep. January 10, 2018; 8 (1): 347.                  

Ca2+-Induced Mitochondrial ROS Regulate the Early Embryonic Cell Cycle., Han Y, Ishibashi S, Iglesias-Gonzalez J, Chen Y, Love NR, Amaya E., Cell Rep. January 2, 2018; 22 (1): 218-231.                              

Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways., Sigg MA, Menchen T, Lee C, Lee C, Johnson J, Jungnickel MK, Choksi SP, Garcia G, Busengdal H, Dougherty GW, Pennekamp P, Werner C, Rentzsch F, Florman HM, Krogan N, Wallingford JB, Omran H, Reiter JF., Dev Cell. December 18, 2017; 43 (6): 744-762.e11.      

Znf703, a novel target of Pax3 and Zic1, regulates hindbrain and neural crest development in Xenopus., Hong CS, Saint-Jeannet JP., Genesis. December 1, 2017; 55 (12):                               

In Vitro Induction of Xenopus Embryonic Organs Using Animal Cap Cells., Ariizumi T, Michiue T, Asashima M., Cold Spring Harb Protoc. December 1, 2017; 2017 (12): pdb.prot097410.

Maternal Dead-end 1 promotes translation of nanos1 by binding the eIF3 complex., Aguero T, Jin Z, Chorghade S, Kalsotra A, King ML, Yang J., Development. October 15, 2017; 144 (20): 3755-3765.                        

Desynchronizing Embryonic Cell Division Waves Reveals the Robustness of Xenopus laevis Development., Anderson GA, Gelens L, Baker JC, Ferrell JE., Cell Rep. October 3, 2017; 21 (1): 37-46.                  

The RNF146 E3 ubiquitin ligase is required for the control of Wnt signaling and body pattern formation in Xenopus., Zhu X, Xing R, Tan R, Dai R, Tao Q, Tao Q., Mech Dev. October 1, 2017; 147 28-36.              

Peroxiredoxin1, a novel regulator of pronephros development, influences retinoic acid and Wnt signaling by controlling ROS levels., Chae S, Lee HK, Lee HK, Kim YK, Jung Sim H, Ji Y, Kim C, Ismail T, Park JW, Kwon OS, Kang BS, Lee DS, Bae JS, Kim SH, Min KJ, Kyu Kwon T, Park MJ, Han JK, Kwon T, Park TJ, Lee HS, Lee HS., Sci Rep. August 21, 2017; 7 (1): 8874.                    

Ingression-type cell migration drives vegetal endoderm internalisation in the Xenopus gastrula., Wen JW, Winklbauer R., Elife. August 10, 2017; 6                           

Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y, Luxardi G, Scerbo P, Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L, Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.                                

H3K4 Methylation-Dependent Memory of Somatic Cell Identity Inhibits Reprogramming and Development of Nuclear Transfer Embryos., Hörmanseder E, Simeone A, Allen GE, Bradshaw CR, Figlmüller M, Gurdon J, Jullien J., Cell Stem Cell. July 6, 2017; 21 (1): 135-143.e6.          

Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2., Scerbo P, Marchal L, Kodjabachian L., Elife. June 27, 2017; 6                               

Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK, Kwon T, Crossman DK, Crowley MR, Wallingford JB, Chang C., Dev Biol. June 15, 2017; 426 (2): 429-441.                    

Developmentally regulated long non-coding RNAs in Xenopus tropicalis., Forouzmand E, Owens NDL, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KWY., Dev Biol. June 15, 2017; 426 (2): 401-408.                  

Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis., Haramoto Y, Saijyo T, Tanaka T, Furuno N, Suzuki A, Ito Y, Kondo M, Taira M, Takahashi S., Dev Biol. June 15, 2017; 426 (2): 374-383.                  

Heterochromatic histone modifications at transposons in Xenopus tropicalis embryos., van Kruijsbergen I, Hontelez S, Elurbe DM, van Heeringen SJ, Huynen MA, Veenstra GJC., Dev Biol. June 15, 2017; 426 (2): 460-471.

The phosphatase Pgam5 antagonizes Wnt/β-Catenin signaling in embryonic anterior-posterior axis patterning., Rauschenberger V, Bernkopf DB, Krenn S, Jalal K, Heller J, Behrens J, Gentzel M, Schambony A., Development. June 15, 2017; 144 (12): 2234-2247.                                      

RARβ2 is required for vertebrate somitogenesis., Janesick A, Tang W, Nguyen TTL, Blumberg B., Development. June 1, 2017; 144 (11): 1997-2008.                                              

Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW., PLoS Genet. May 12, 2017; 13 (5): e1006757.                                    

Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y, Ploper D, Sosa EA, Colozza G, Moriyama Y, Benitez MD, Zhang K, Merkurjev D, De Robertis EM., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.                        

Chromatin tethering to the nuclear envelope by nuclear actin filaments: a novel role of the actin cytoskeleton in the Xenopus blastula., Oda H, Shirai N, Ura N, Ohsumi K, Iwabuchi M., Genes Cells. April 1, 2017; 22 (4): 376-391.              

Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program., Charney RM, Forouzmand E, Cho JS, Cheung J, Paraiso KD, Yasuoka Y, Takahashi S, Taira M, Blitz IL, Xie X, Cho KW., Dev Cell. March 27, 2017; 40 (6): 595-607.e4.

Actomyosin-generated tension on cadherin is similar between dividing and non-dividing epithelial cells in early Xenopus laevis embryos., Herbomel G, Hatte G, Roul J, Padilla-Parra S, Tassan JP, Tramier M., Sci Rep. March 22, 2017; 7 45058.                                    

Comparative study of diclofenac-induced embryotoxicity and teratogenesis in Xenopus laevis and Lithobates catesbeianus, using the frog embryo teratogenesis assay: Xenopus (FETAX)., Cardoso-Vera JD, Islas-Flores H, SanJuan-Reyes N, Montero-Castro EI, Galar-Martínez M, García-Medina S, Elizalde-Velázquez A, Dublán-García O, Gómez-Oliván LM., Sci Total Environ. January 1, 2017; 574 467-475.

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