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Summary Stage Literature (2200) Attributions Wiki
XB-STAGE-7

Papers associated with gastrula stage

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Activation of a T-box-Otx2-Gsc gene network independent of TBP and TBP-related factors., Gazdag E, Jacobi UG, van Kruijsbergen I, Weeks DL, Veenstra GJ., Development. April 15, 2016; 143 (8): 1340-50.                    

Developing Xenopus embryos recover by compacting and expelling single wall carbon nanotubes., Holt BD, Shawky JH, Dahl KN, Davidson LA, Islam MF., J Appl Toxicol. April 1, 2016; 36 (4): 579-85.

PLD1 regulates Xenopus convergent extension movements by mediating Frizzled7 endocytosis for Wnt/PCP signal activation., Lee H, Lee SJ, Kim GH, Yeo I, Han JK., Dev Biol. March 1, 2016; 411 (1): 38-49.                          

Noggin4 is a long-range inhibitor of Wnt8 signalling that regulates head development in Xenopus laevis., Eroshkin FM, Nesterenko AM, Borodulin AV, Martynova NY, Ermakova GV, Gyoeva FK, Orlov EE, Belogurov AA, Lukyanov KA, Bayramov AV, Zaraisky AG., Sci Rep. January 22, 2016; 6 23049.                                                            

Differential requirement of bone morphogenetic protein receptors Ia (ALK3) and Ib (ALK6) in early embryonic patterning and neural crest development., Schille C, Heller J, Schambony A., BMC Dev Biol. January 19, 2016; 16 1.                          

Identification of p62/SQSTM1 as a component of non-canonical Wnt VANGL2-JNK signalling in breast cancer., Puvirajesinghe TM, Bertucci F, Jain A, Scerbo P, Belotti E, Audebert S, Sebbagh M, Lopez M, Brech A, Finetti P, Charafe-Jauffret E, Chaffanet M, Castellano R, Restouin A, Marchetto S, Collette Y, Gonçalvès A, Macara I, Birnbaum D, Kodjabachian L, Johansen T, Borg JP., Nat Commun. January 12, 2016; 7 10318.                                  

lin28 proteins promote expression of 17∼92 family miRNAs during amphibian development., Warrander F, Faas L, Kovalevskiy O, Peters D, Coles M, Antson AA, Genever P, Isaacs HV., Dev Dyn. January 1, 2016; 245 (1): 34-46.            

Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C, Shi DL., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.            

Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1., Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK., Dev Biol. January 1, 2016; 409 (1): 26-38.                

Expression pattern of bcar3, a downstream target of Gata2, and its binding partner, bcar1, during Xenopus development., Green YS, Kwon S, Christian JL., Gene Expr Patterns. January 1, 2016; 20 (1): 55-62.                  

[Surface Microdeformations and Regulation of Cell Movements in Xenopus Development]., Evstifeeva AY, Belousov LV., Ontogenez. January 1, 2016; 47 (1): 3-14.

Platelet derived growth factor B gene expression in the Xenopus laevis developing central nervous system., Giannetti K, Corsinovi D, Rossino C, Appolloni I, Malatesta P, Ori M., Int J Dev Biol. January 1, 2016; 60 (4-6): 175-9.      

Genes regulated by potassium channel tetramerization domain containing 15 (Kctd15) in the developing neural crest., Wong TC, Rebbert M, Wang C, Wang C, Wang C, Chen X, Heffer A, Zarelli VE, Dawid IB, Zhao H., Int J Dev Biol. January 1, 2016; 60 (4-6): 159-66.                      

The PTK7 and ROR2 Protein Receptors Interact in the Vertebrate WNT/Planar Cell Polarity (PCP) Pathway., Martinez S, Scerbo P, Giordano M, Daulat AM, Lhoumeau AC, Thomé V, Kodjabachian L, Borg JP., J Biol Chem. December 18, 2015; 290 (51): 30562-72.                        

Embryonic transcription is controlled by maternally defined chromatin state., Hontelez S, van Kruijsbergen I, Georgiou G, van Heeringen SJ, Bogdanovic O, Lister R, Veenstra GJC., Nat Commun. December 18, 2015; 6 10148.                

Cell-Autonomous Ca(2+) Flashes Elicit Pulsed Contractions of an Apical Actin Network to Drive Apical Constriction during Neural Tube Closure., Christodoulou N, Skourides PA., Cell Rep. December 15, 2015; 13 (10): 2189-202.                

Affinity of the heparin binding motif of Noggin1 to heparan sulfate and its visualization in the embryonic tissues., Nesterenko AM, Orlov EE, Ermakova GV, Ivanov IA, Semenyuk PI, Orlov VN, Martynova NY, Zaraisky AG., Biochem Biophys Res Commun. December 4, 2015; 468 (1-2): 331-6.        

Hspa9 is required for pronephros specification and formation in Xenopus laevis., Gassié L, Lombard A, Moraldi T, Bibonne A, Leclerc C, Moreau M, Marlier A, Gilbert T., Dev Dyn. December 1, 2015; 244 (12): 1538-49.                      

Pou5f3.2-induced proliferative state of embryonic cells during gastrulation of Xenopus laevis embryo., Nishitani E, Li C, Lee J, Hotta H, Katayama Y, Yamaguchi M, Kinoshita T., Dev Growth Differ. December 1, 2015; 57 (9): 591-600.              

G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus., Miyagi A, Negishi T, Yamamoto TS, Ueno N., Dev Biol. November 1, 2015; 407 (1): 131-44.                                          

Sebox regulates mesoderm formation in early amphibian embryos., Chen G, Tan R, Tao Q, Tao Q., Dev Dyn. November 1, 2015; 244 (11): 1415-26.              

NF2/Merlin is required for the axial pattern formation in the Xenopus laevis embryo., Zhu X, Min Z, Tan R, Tao Q, Tao Q., Mech Dev. November 1, 2015; 138 Pt 3 305-12.                

GATA2 regulates Wnt signaling to promote primitive red blood cell fate., Mimoto MS, Kwon S, Green YS, Goldman D, Christian JL., Dev Biol. November 1, 2015; 407 (1): 1-11.                          

Novel Reporter for Faithful Monitoring of ERK2 Dynamics in Living Cells and Model Organisms., Sipieter F, Cappe B, Gonzalez Pisfil M, Spriet C, Bodart JF, Cailliau-Maggio K, Vandenabeele P, Héliot L, Riquet FB., PLoS One. October 20, 2015; 10 (10): e0140924.          

Epigenetic modification maintains intrinsic limb-cell identity in Xenopus limb bud regeneration., Hayashi S, Kawaguchi A, Uchiyama I, Kawasumi-Kita A, Kobayashi T, Nishide H, Tsutsumi R, Tsuru K, Inoue T, Ogino H, Agata K, Tamura K, Yokoyama H., Dev Biol. October 15, 2015; 406 (2): 271-82.              

Prdm12 specifies V1 interneurons through cross-repressive interactions with Dbx1 and Nkx6 genes in Xenopus., Thélie A, Desiderio S, Hanotel J, Quigley I, Van Driessche B, Rodari A, Borromeo MD, Kricha S, Lahaye F, Croce J, Cerda-Moya G, Ordoño Fernandez J, Bolle B, Lewis KE, Sander M, Pierani A, Schubert M, Johnson JE, Kintner CR, Pieler T, Van Lint C, Henningfeld KA, Bellefroid EJ, Van Campenhout C., Development. October 1, 2015; 142 (19): 3416-28.                                    

Histone H3 lysine 9 trimethylation is required for suppressing the expression of an embryonically activated retrotransposon in Xenopus laevis., Herberg S, Simeone A, Oikawa M, Jullien J, Bradshaw CR, Teperek M, Gurdon J, Miyamoto K., Sci Rep. September 21, 2015; 5 14236.        

Budgett's frog (Lepidobatrachus laevis): A new amphibian embryo for developmental biology., Amin NM, Womble M, Ledon-Rettig C, Hull M, Dickinson A, Nascone-Yoder N., Dev Biol. September 15, 2015; 405 (2): 291-303.                  

Genome-Wide Identification and Expression of Xenopus F-Box Family of Proteins., Saritas-Yildirim B, Pliner HA, Ochoa A, Silva EM., PLoS One. September 1, 2015; 10 (9): e0136929.                                                        

Conformational change of Dishevelled plays a key regulatory role in the Wnt signaling pathways., Lee HJ, Shi DL, Zheng JJ., Elife. August 22, 2015; 4 e08142.                      

JmjC Domain-containing Protein 6 (Jmjd6) Derepresses the Transcriptional Repressor Transcription Factor 7-like 1 (Tcf7l1) and Is Required for Body Axis Patterning during Xenopus Embryogenesis., Zhang X, Gao Y, Lu L, Zhang Z, Zhang Z, Gan S, Xu L, Lei A, Cao Y, Cao Y., J Biol Chem. August 14, 2015; 290 (33): 20273-83.                      

Xenopus Pkdcc1 and Pkdcc2 Are Two New Tyrosine Kinases Involved in the Regulation of JNK Dependent Wnt/PCP Signaling Pathway., Vitorino M, Silva AC, Inácio JM, Ramalho JS, Gur M, Fainsod A, Steinbeisser H, Belo JA., PLoS One. August 13, 2015; 10 (8): e0135504.                                    

Paraxis is required for somite morphogenesis and differentiation in Xenopus laevis., Sánchez RS, Sánchez SS., Dev Dyn. August 1, 2015; 244 (8): 973-87.                              

Myocyte enhancer factor 2D regulates ectoderm specification and adhesion properties of animal cap cells in the early Xenopus embryo., Katz Imberman S, Kolpakova A, Keren A, Bengal E., FEBS J. August 1, 2015; 282 (15): 2930-47.

Short linear motif acquisition, exon formation and alternative splicing determine a pathway to diversity for NCoR-family co-repressors., Short S, Peterkin T, Guille M, Patient R, Sharpe C., Open Biol. August 1, 2015; 5 (8):                       

MgcRacGAP restricts active RhoA at the cytokinetic furrow and both RhoA and Rac1 at cell-cell junctions in epithelial cells., Breznau EB, Semack AC, Higashi T, Miller AL, Miller AL., Mol Biol Cell. July 1, 2015; 26 (13): 2439-55.                

Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin., Lu L, Gao Y, Zhang Z, Cao Q, Zhang X, Zou J, Cao Y., Dev Cell. June 22, 2015; 33 (6): 660-74.                                  

On the origin of vertebrate somites., Onai T, Aramaki T, Inomata H, Hirai T, Kuratani S., Zoological Lett. June 15, 2015; 1 33.              

A time space translation hypothesis for vertebrate axial patterning., Durston AJ, Zhu K., Semin Cell Dev Biol. June 1, 2015; 42 86-93.  

Identification of REST targets in the Xenopus tropicalis genome., Saritas-Yildirim B, Childers CP, Elsik CG, Silva EM., BMC Genomics. May 14, 2015; 16 380.                                          

The prodomain of BMP4 is necessary and sufficient to generate stable BMP4/7 heterodimers with enhanced bioactivity in vivo., Neugebauer JM, Kwon S, Kim HS, Donley N, Tilak A, Sopory S, Christian JL., Proc Natl Acad Sci U S A. May 5, 2015; 112 (18): E2307-16.            

Early neural ectodermal genes are activated by Siamois and Twin during blastula stages., Klein SL, Moody SA., Genesis. May 1, 2015; 53 (5): 308-20.          

Sulf1 has ligand-dependent effects on canonical and non-canonical Wnt signalling., Fellgett SW, Maguire RJ, Pownall ME., J Cell Sci. April 1, 2015; 128 (7): 1408-21.                        

Cellular analysis of cleavage-stage chick embryos reveals hidden conservation in vertebrate early development., Nagai H, Sezaki M, Kakiguchi K, Nakaya Y, Lee HC, Ladher R, Sasanami T, Han JY, Yonemura S, Sheng G., Development. April 1, 2015; 142 (7): 1279-86.      

Expression of phosphatidylcholine biosynthetic enzymes during early embryogenesis in the amphibian Bufo arenarum., Fernández-Bussy R, Mouguelar V, Banchio C, Coux G., Zygote. April 1, 2015; 23 (2): 257-65.

Dorsoventral patterning of the Xenopus eye involves differential temporal changes in the response of optic stalk and retinal progenitors to Hh signalling., Wang X, Lupo G, He R, Barsacchi G, Harris WA, Liu Y., Neural Dev. March 20, 2015; 10 7.              

The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation., Acosta H, Iliev D, Grahn TH, Gouignard N, Maccarana M, Griesbach J, Herzmann S, Sagha M, Climent M, Pera EM., Development. March 15, 2015; 142 (6): 1146-58.                                    

Regulation of nuclear-cytoplasmic shuttling and function of Family with sequence similarity 13, member A (Fam13a), by B56-containing PP2As and Akt., Jin Z, Chung JW, Mei W, Strack S, He C, Lau GW, Yang J., Mol Biol Cell. March 15, 2015; 26 (6): 1160-73.                  

TRPP2-dependent Ca2+ signaling in dorso-lateral mesoderm is required for kidney field establishment in Xenopus., Futel M, Leclerc C, Le Bouffant R, Buisson I, Néant I, Umbhauer M, Moreau M, Riou JF., J Cell Sci. March 1, 2015; 128 (5): 888-99.                      

Distinct functionality of dishevelled isoforms on Ca2+/calmodulin-dependent protein kinase 2 (CamKII) in Xenopus gastrulation., Gentzel M, Schille C, Rauschenberger V, Schambony A., Mol Biol Cell. March 1, 2015; 26 (5): 966-77.              

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