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Summary Anatomy Item Literature (1272) Expression Attributions Wiki
XB-ANAT-89

Papers associated with endoderm

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Nodal and churchill1 position the expression of a notch ligand during Xenopus germ layer segregation., Favarolo MB., Life Sci Alliance. 5 (12):


The complete dorsal structure is formed from only the blastocoel roof of Xenopus blastula: insight into the gastrulation movement evolutionarily conserved among chordates., Sato Y., Dev Genes Evol. June 1, 2023; 233 (1): 1-12.                


Blastopore gating mechanism to regulate extracellular fluid excretion., Kato S., iScience. May 19, 2023; 26 (5): 106585.


ccl19 and ccl21 affect cell movements and differentiation in early Xenopus development., Goto T., Dev Growth Differ. April 1, 2023; 65 (3): 175-189.                


Dorsal lip maturation and initial archenteron extension depend on Wnt11 family ligands., Van Itallie ES., Dev Biol. January 1, 2023; 493 67-79.                                                      


maea affects head formation through ß-catenin degradation during early Xenopus laevis development., Goto T., Dev Growth Differ. January 1, 2023; 65 (1): 29-36.                  


Hnf1b renal expression directed by a distal enhancer responsive to Pax8., Goea L., Sci Rep. November 19, 2022; 12 (1): 19921.            


Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.                                            


Microsurgical Methods to Make the Keller Sandwich Explant and the Dorsal Isolate., Davidson LA., Cold Spring Harb Protoc. November 1, 2022; 2022 (11): Pdb.prot097386.


Microsurgical Methods to Isolate and Culture the Early Gastrula Dorsal Marginal Zone., Davidson LA, Davidson LA., Cold Spring Harb Protoc. November 1, 2022; 2022 (11): Pdb.prot097360.


Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K., BMC Genomics. October 23, 2022; 23 (1): 723.                                  


Nascent transcriptome reveals orchestration of zygotic genome activation in early embryogenesis., Chen H., Curr Biol. October 10, 2022; 32 (19): 4314-4324.e7.                        


Eph/ephrin signaling controls cell contacts and formation of a structurally asymmetrical tissue boundary in the Xenopus gastrula., Barua D., Dev Biol. October 1, 2022; 490 73-85.                        


The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development., Rankin SA, Rankin SA., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.            


GJA1 depletion causes ciliary defects by affecting Rab11 trafficking to the ciliary base., Jang DG., Elife. August 25, 2022; 11                                       


Evo-Devo of Urbilateria and its larval forms., De Robertis EM., Dev Biol. July 1, 2022; 487 10-20.        


ccr7 affects both morphogenesis and differentiation during early Xenopus embryogenesis., Goto T., Dev Growth Differ. June 1, 2022; 64 (5): 254-260.        


Characterization of convergent thickening, a major convergence force producing morphogenic movement in amphibians., Shook DR., Elife. April 11, 2022; 11                                     


PCD Genes-From Patients to Model Organisms and Back to Humans., Niziolek M., Int J Mol Sci. February 3, 2022; 23 (3):       


Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.                                


Retinoic Acid is Required for Normal Morphogenetic Movements During Gastrulation., Gur M., Front Cell Dev Biol. January 1, 2022; 10 857230.                  


dmrt2 and myf5 Link Early Somitogenesis to Left-Right Axis Determination in Xenopus laevis., Tingler M., Front Cell Dev Biol. January 1, 2022; 10 858272.                  


inka1b expression in the head mesoderm is dispensable for facial cartilage development., Jeon H., Gene Expr Patterns. January 1, 2022; 45 119262.              


Comparison of RNA localization during oogenesis within Acipenser ruthenus and Xenopus laevis., Iegorova V., Front Cell Dev Biol. January 1, 2022; 10 982732.                


Abnormal left-right organizer and laterality defects in Xenopus embryos after formin inhibitor SMIFH2 treatment., Petri N., PLoS One. January 1, 2022; 17 (11): e0275164.        


Eya1 protein distribution during embryonic development of Xenopus laevis., Almasoudi SH., Gene Expr Patterns. December 1, 2021; 42 119213.                                        


Imaging of dynamic actin remodeling reveals distinct behaviors of head and trunk mesoderm in gastrulating Xenopus laevis., Komatsu V., MicroPubl Biol. October 14, 2021; 2021     


Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development., Rankin SA, Rankin SA., Elife. October 13, 2021; 10


Huntingtin CAG expansion impairs germ layer patterning in synthetic human 2D gastruloids through polarity defects., Galgoczi S., Development. October 1, 2021; 148 (19):               


Cell-cell contact landscapes in Xenopus gastrula tissues., Barua D., Proc Natl Acad Sci U S A. September 28, 2021; 118 (39):                                           


Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5., Maerker M., Nat Commun. September 16, 2021; 12 (1): 5482.                              


Single-minded 2 is required for left-right asymmetric stomach morphogenesis., Wyatt BH., Development. September 1, 2021; 148 (17):                 


Ptk7 Is Dynamically Localized at Neural Crest Cell-Cell Contact Sites and Functions in Contact Inhibition of Locomotion., Grund A., Int J Mol Sci. August 28, 2021; 22 (17):                   


Modeling human congenital disorders with neural crest developmental defects using patient-derived induced pluripotent stem cells., Okuno H., Regen Ther. August 24, 2021; 18 275-280.      


Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):                               


The dorsal blastopore lip is a source of signals inducing planar cell polarity in the Xenopus neural plate., Mancini P., Biol Open. July 15, 2021; 10 (7):                 


BMP signaling is enhanced intracellularly by FHL3 controlling WNT-dependent spatiotemporal emergence of the neural crest., Alkobtawi M., Cell Rep. June 22, 2021; 35 (12): 109289.                        


Protocadherin-1 is expressed in the notochord of mouse embryo but is dispensable for its formation., Fukunaga K., Biochem Biophys Rep. June 15, 2021; 27 101047.          


Altering metabolite distribution at Xenopus cleavage stages affects left-right gene expression asymmetries., Onjiko RM., Genesis. June 1, 2021; 59 (5-6): e23418.          


Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.                        


RNA demethylation by FTO stabilizes the FOXJ1 mRNA for proper motile ciliogenesis., Kim H., Dev Cell. April 19, 2021; 56 (8): 1118-1130.e6.                                  


4-Octylphenol induces developmental abnormalities and interferes the differentiation of neural crest cells in Xenopus laevis embryos., Xu Y., Environ Pollut. April 1, 2021; 274 116560.  


Capillarity and active cell movement at mesendoderm translocation in the Xenopus gastrula., Nagel M., Development. March 29, 2021; 148 (18):                                   


Furry is required for cell movements during gastrulation and functionally interacts with NDR1., Cervino AS., Sci Rep. March 23, 2021; 11 (1): 6607.                                  


Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM., Biol Open. February 25, 2021; 10 (2):                 


Modeling endoderm development and disease in Xenopus., Edwards NA., Curr Top Dev Biol. January 1, 2021; 145 61-90.


Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.                  


Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.            


Pinhead signaling regulates mesoderm heterogeneity via the FGF receptor-dependent pathway., Ossipova O., Development. September 11, 2020; 147 (17):                 


Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S., Elife. September 7, 2020; 9                           

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