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Correlation Between Subgenome-biased DNA Loss and DNA Transposon Activation Following Hybridization in the Allotetraploid Xenopus Frogs. , Suda K, Suzuki T, Hayashi S, Okuyama H, Tsukamoto D, Matsuo T, Tamura K , Ito M., Genome Biol Evol. September 3, 2024; 16 (9):
hoxc12/c13 as key regulators for rebooting the developmental program in Xenopus limb regeneration. , Kawasumi-Kita A, Lee SW, Ohtsuka D, Niimi K, Asakura Y, Kitajima K, Sakane Y, Tamura K , Ochi H , Suzuki KT , Morishita Y., Nat Commun. April 22, 2024; 15 (1): 3340.
An archetype and scaling of developmental tissue dynamics across species. , Morishita Y, Lee SW, Suzuki T, Yokoyama H , Kamei Y, Tamura K , Kawasumi-Kita A., Nat Commun. December 11, 2023; 14 (1): 8199.
Promoter generation for the chimeric sex-determining gene dm-W in Xenopus frogs. , Hayashi S, Tamura K , Tsukamoto D, Ogita Y, Takamatsu N, Ito M., Genes Genet Syst. September 5, 2023; 98 (2): 53-60.
The shh limb enhancer is activated in patterned limb regeneration but not in hypomorphic limb regeneration in Xenopus laevis. , Tada R, Higashidate T, Amano T , Ishikawa S, Yokoyama C, Kobari S, Nara S, Ishida K, Kawaguchi A, Ochi H , Ogino H , Yakushiji-Kaminatsui N, Sakamoto J, Kamei Y, Tamura K , Yokoyama H ., Dev Biol. May 27, 2023; 500 22-30.
Neofunctionalization of a Noncoding Portion of a DNA Transposon in the Coding Region of the Chimerical Sex-Determining Gene dm-W in Xenopus Frogs. , Hayashi S, Suda K, Fujimura F, Fujikawa M, Tamura K , Tsukamoto D, Evans BJ , Takamatsu N, Ito M., Mol Biol Evol. July 2, 2022; 39 (7):
Activation of DNA Transposons and Evolution of piRNA Genes Through Interspecific Hybridization in Xenopus Frogs. , Suda K, Hayashi SR, Tamura K , Takamatsu N, Ito M., Front Genet. January 1, 2022; 13 766424.
Independent pseudogenizations and losses of sox15 during amniote diversification following asymmetric ohnolog evolution. , Ogita Y, Tamura K , Mawaribuchi S, Takamatsu N, Ito M., BMC Ecol Evol. June 30, 2021; 21 (1): 134.
Insights regarding skin regeneration in non-amniote vertebrates: Skin regeneration without scar formation and potential step-up to a higher level of regeneration. , Abe G, Hayashi T, Yoshida K, Yoshida T, Kudoh H, Sakamoto J, Konishi A, Kamei Y, Takeuchi T, Tamura K , Yokoyama H ., Semin Cell Dev Biol. April 1, 2020; 100 109-121.
PACT/PRKRA and p53 regulate transcriptional activity of DMRT1. , Fujitani K, Otomo A, Nagayama Y, Tachibana T, Kato R, Kawashima Y, Kodera Y, Kato T , Takada S, Tamura K , Takamatsu N , Ito M., Genet Mol Biol. March 30, 2020; 43 (2): e20190017.
Skin regeneration of amphibians: A novel model for skin regeneration as adults. , Yokoyama H , Kudo N, Todate M, Shimada Y, Suzuki M , Tamura K ., Dev Growth Differ. August 1, 2018; 60 (6): 316-325.
Cells from subcutaneous tissues contribute to scarless skin regeneration in Xenopus laevis froglets. , Otsuka-Yamaguchi R, Kawasumi-Kita A, Kudo N, Izutsu Y , Tamura K , Yokoyama H ., Dev Dyn. August 1, 2017; 246 (8): 585-597.
Masculinization-Related Genes and Cell-Mass Structures During Early Gonadal Differentiation in the African Clawed Frog Xenopus laevis. , Wada M, Fujitani K, Tamura K , Mawaribuchi S, Kamata Y, Takamatsu N, Ito M., Zoolog Sci. April 1, 2017; 34 (2): 105-111.
Application of local gene induction by infrared laser-mediated microscope and temperature stimulator to amphibian regeneration study. , Kawasumi-Kita A, Hayashi T, Kobayashi T, Nagayama C, Hayashi S, Kamei Y, Morishita Y, Takeuchi T, Tamura K , Yokoyama H ., Dev Growth Differ. December 1, 2015; 57 (9): 601-13.
Epigenetic modification maintains intrinsic limb-cell identity in Xenopus limb bud regeneration. , Hayashi S, Kawaguchi A, Uchiyama I, Kawasumi-Kita A, Kobayashi T, Nishide H, Tsutsumi R, Tsuru K, Inoue T, Ogino H , Agata K, Tamura K , Yokoyama H ., Dev Biol. October 15, 2015; 406 (2): 271-82.
Evidence for an amphibian sixth digit. , Hayashi S, Kobayashi T, Yano T, Kamiyama N, Egawa S, Seki R, Takizawa K, Okabe M, Yokoyama H , Tamura K ., Zoological Lett. June 15, 2015; 1 17.
Apoptosis and differentiation of Xenopus tail-derived myoblasts by thyroid hormone. , Tamura K , Takayama S, Ishii T, Mawaribuchi S, Takamatsu N, Ito M., J Mol Endocrinol. June 1, 2015; 54 (3): 185-92.
Roles of Hippo signaling pathway in size control of organ regeneration. , Hayashi S, Yokoyama H , Tamura K ., Dev Growth Differ. May 1, 2015; 57 (4): 341-51.
Erythropoietin protects red blood cells from TRAIL1-induced cell death during red blood cell transition in Xenopus laevis. , Tamura K , Takamatsu N, Ito M., Mol Cell Biochem. January 1, 2015; 398 (1-2): 73-81.
Transcriptional regulators in the Hippo signaling pathway control organ growth in Xenopus tadpole tail regeneration. , Hayashi S, Ochi H , Ogino H , Kawasumi A, Kamei Y, Tamura K , Yokoyama H ., Dev Biol. December 1, 2014; 396 (1): 31-41.
Yap1, transcription regulator in the Hippo signaling pathway, is required for Xenopus limb bud regeneration. , Hayashi S, Tamura K , Yokoyama H ., Dev Biol. April 1, 2014; 388 (1): 57-67.
Wound healing in mammals and amphibians: toward limb regeneration in mammals. , Kawasumi A, Sagawa N, Hayashi S, Yokoyama H , Tamura K ., Curr Top Microbiol Immunol. January 1, 2013; 367 33-49.
Apoptotic and survival signaling mediated through death receptor members during metamorphosis in the African clawed frog Xenopus laevis. , Ito M, Tamura K , Mawaribuchi S, Takamatsu N., Gen Comp Endocrinol. May 1, 2012; 176 (3): 461-4.
Prx-1 expression in Xenopus laevis scarless skin-wound healing and its resemblance to epimorphic regeneration. , Yokoyama H , Maruoka T, Aruga A, Amano T , Ohgo S, Shiroishi T, Tamura K ., J Invest Dermatol. December 1, 2011; 131 (12): 2477-85.
Different requirement for Wnt/ β-catenin signaling in limb regeneration of larval and adult Xenopus. , Yokoyama H , Maruoka T, Ochi H , Aruga A , Ohgo S, Ogino H , Tamura K ., PLoS One. January 1, 2011; 6 (7): e21721.
Analysis of hoxa11 and hoxa13 expression during patternless limb regeneration in Xenopus. , Ohgo S, Itoh A, Suzuki M , Satoh A , Yokoyama H , Tamura K ., Dev Biol. February 15, 2010; 338 (2): 148-57.
Tumor necrosis factor-related apoptosis-inducing ligand 1 ( TRAIL1) enhances the transition of red blood cells from the larval to adult type during metamorphosis in Xenopus. , Tamura K , Mawaribuchi S, Yoshimoto S, Shiba T, Takamatsu N, Ito M., Blood. January 28, 2010; 115 (4): 850-9.
Effects of activation of hedgehog signaling on patterning, growth, and differentiation in Xenopus froglet limb regeneration. , Yakushiji N, Suzuki M , Satoh A , Ide H , Tamura K ., Dev Dyn. August 1, 2009; 238 (8): 1887-96.
Repatterning in amphibian limb regeneration: A model for study of genetic and epigenetic control of organ regeneration. , Yakushiji N, Yokoyama H , Tamura K ., Semin Cell Dev Biol. July 1, 2009; 20 (5): 565-74.
Xenopus W-linked DM-W induces Foxl2 and Cyp19 expression during ovary formation. , Okada E, Yoshimoto S, Ikeda N, Kanda H, Tamura K , Shiba T, Takamatsu N, Ito M., Sex Dev. January 1, 2009; 3 (1): 38-42.
Tumor necrosis factor-alpha attenuates thyroid hormone-induced apoptosis in vascular endothelial cell line XLgoo established from Xenopus tadpole tails. , Mawaribuchi S, Tamura K , Okano S, Takayama S, Yaoita Y , Shiba T, Takamatsu N, Ito M., Endocrinology. July 1, 2008; 149 (7): 3379-89.
A W-linked DM-domain gene, DM-W, participates in primary ovary development in Xenopus laevis. , Yoshimoto S, Okada E, Umemoto H, Tamura K , Uno Y , Nishida-Umehara C, Matsuda Y, Takamatsu N, Shiba T, Ito M., Proc Natl Acad Sci U S A. February 19, 2008; 105 (7): 2469-74.
Mitf contributes to melanosome distribution and melanophore dendricity. , Kawasaki A, Kumasaka M, Satoh A , Suzuki M , Tamura K , Goto T , Asashima M , Yamamoto H., Pigment Cell Melanoma Res. February 1, 2008; 21 (1): 56-62.
Correlation between Shh expression and DNA methylation status of the limb-specific Shh enhancer region during limb regeneration in amphibians. , Yakushiji N, Suzuki M , Satoh A , Sagai T, Shiroishi T, Kobayashi H, Sasaki H, Ide H , Tamura K ., Dev Biol. December 1, 2007; 312 (1): 171-82.
Transgenic Xenopus with prx1 limb enhancer reveals crucial contribution of MEK/ ERK and PI3K/AKT pathways in blastema formation during limb regeneration. , Suzuki M , Satoh A , Ide H , Tamura K ., Dev Biol. April 15, 2007; 304 (2): 675-86.
Characterization of Xenopus digits and regenerated limbs of the froglet. , Satoh A , Endo T, Abe M, Yakushiji N, Ohgo S, Tamura K , Ide H ., Dev Dyn. December 1, 2006; 235 (12): 3316-26.
Expression and promoter analysis of Xenopus DMRT1 and functional characterization of the transactivation property of its protein. , Yoshimoto S, Okada E, Oishi T, Numagami R, Umemoto H, Tamura K , Kanda H, Shiba T, Takamatsu N, Ito M., Dev Growth Differ. December 1, 2006; 48 (9): 597-603.
Xenopus death-domain-containing proteins FADD and RIP1 synergistically activate JNK and NF-kappaB. , Ishizawa YH, Tamura K , Yamaguchi T, Matsumoto K , Komiyama M, Takamatsu N, Shiba T, Ito M., Biol Cell. August 1, 2006; 98 (8): 465-78.
Limb regeneration in Xenopus laevis froglet. , Suzuki M , Yakushiji N, Nakada Y, Satoh A , Ide H , Tamura K ., ScientificWorldJournal. May 12, 2006; 6 Suppl 1 26-37.
Analysis of scleraxis and dermo-1 genes in a regenerating limb of Xenopus laevis. , Satoh A , Nakada Y, Suzuki M , Tamura K , Ide H ., Dev Dyn. April 1, 2006; 235 (4): 1065-73.
Characteristics of initiation and early events for muscle development in the Xenopus limb bud. , Satoh A , Sakamaki K, Ide H , Tamura K ., Dev Dyn. December 1, 2005; 234 (4): 846-57.
Nerve-dependent and -independent events in blastema formation during Xenopus froglet limb regeneration. , Suzuki M , Satoh A , Ide H , Tamura K ., Dev Biol. October 1, 2005; 286 (1): 361-75.
Joint development in Xenopus laevis and induction of segmentations in regenerating froglet limb ( spike). , Satoh A , Suzuki M , Amano T , Tamura K , Ide H ., Dev Dyn. August 1, 2005; 233 (4): 1444-53.
Muscle formation in regenerating Xenopus froglet limb. , Satoh A , Ide H , Tamura K ., Dev Dyn. June 1, 2005; 233 (2): 337-46.
Xenopus death receptor-M1 and -M2, new members of the tumor necrosis factor receptor superfamily, trigger apoptotic signaling by differential mechanisms. , Tamura K , Noyama T, Ishizawa YH, Takamatsu N, Shiba T, Ito M., J Biol Chem. February 27, 2004; 279 (9): 7629-35.
Anteroposterior axis formation in Xenopus limb bud recombinants: a model of pattern formation during limb regeneration. , Yokoyama H , Tamura K , Ide H ., Dev Dyn. November 1, 2002; 225 (3): 277-88.
FGF-10 stimulates limb regeneration ability in Xenopus laevis. , Yokoyama H , Ide H , Tamura K ., Dev Biol. May 1, 2001; 233 (1): 72-9.
An epidermal signal regulates Lmx-1 expression and dorsal- ventral pattern during Xenopus limb regeneration. , Matsuda H, Yokoyama H , Endo T, Tamura K , Ide H ., Dev Biol. January 15, 2001; 229 (2): 351-62.
Analysis of gene expressions during Xenopus forelimb regeneration. , Endo T, Tamura K , Ide H ., Dev Biol. April 15, 2000; 220 (2): 296-306.
Mesenchyme with fgf-10 expression is responsible for regenerative capacity in Xenopus limb buds. , Yokoyama H , Yonei-Tamura S, Endo T, Izpisúa Belmonte JC , Tamura K , Ide H ., Dev Biol. March 1, 2000; 219 (1): 18-29.