sia1 Phenotypes

Summary

Expression

Phenotypes

Gene Literature (285)

XB-GENEPAGE-482367

Gene Symbol: sia1 Gene Name: siamois homeodomain 1

Anatomical Phenotypes Phenotypes manually curated with terms from the Xenopus phenotype ontology covering anatomical, gene ontology, and neurobehavioral phenotypes.
obsolete duplicated anterior-posterior axis (6 sources), decreased length of anterior-posterior axis (4 sources), decreased size of the tail (3 sources), abnormal dorsal/ventral axis specification (2 sources), abnormal tail morphology (2 sources), absent head (2 sources), absent notochord (2 sources), decreased size of the trunk (2 sources), wholly ventralized embryo (2 sources), abnormal dorsal fin morphology (1 source), abnormally dorsalized embryo (1 source), abnormally posterioralized embryo (1 source), abnormally ventrally curved tail (1 source), absent neural tube (1 source), absent somite (1 source), fused somites (1 source), increased size of the ventral trunk (1 source)

Anatomical Phenotypes

Phenotypes manually curated with terms from the Xenopus phenotype ontology covering anatomical, gene ontology, and neurobehavioral phenotypes.

obsolete duplicated anterior-posterior axis (6 sources), decreased length of anterior-posterior axis (4 sources), decreased size of the tail (3 sources), abnormal dorsal/ventral axis specification (2 sources), abnormal tail morphology (2 sources), absent head (2 sources), absent notochord (2 sources), decreased size of the trunk (2 sources), wholly ventralized embryo (2 sources), abnormal dorsal fin morphology (1 source), abnormally dorsalized embryo (1 source), abnormally posterioralized embryo (1 source), abnormally ventrally curved tail (1 source), absent neural tube (1 source), absent somite (1 source), fused somites (1 source), increased size of the ventral trunk (1 source)

Expression Phenotypes Gene expression phenotype annotations where the gene of interest has been disrupted (manipulated) or is the gene assayed (assayed). Computed annotations are derived from differential expression analysis from Xenbase processed GEO data with the criteria of a TPM >= 1, FDR <= 0.05 and an absolute LogFC >= 2.
Manual annotations: sia1 manipulated (25 sources), sia1 assayed (21 sources)
Computed annotations: sia1 manipulated (2 sources), sia1 assayed (27 sources)

Experiments (Reagents) These are short form descriptions of experiments using reagents targeting the gene of interest.
Xla Wt + sia1 MO + sia2 MO (7 sources), Xla Wt + sia1 (2 sources), Xla Wt + sia1 MO (2 sources), Xla Wt + sia1 MO + sia2 MO (2 sources), Xla Wt + sia1 MO + sia2 MO (2 sources), Xla.pigmented(Nasco) + sia1 (2 sources), Xla Wt + cer1del + sia1 (1 source), Xla Wt + lhx1 + otx2 + sia1 MO + sia2 MO (1 source), Xla Wt + myc-sia1 (1 source), Xla Wt + nodal1 + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 + ctnnb1 MO (1 source), Xla Wt + sia1 + sia2 (1 source), Xla Wt + sia1 + sox17b.2 (1 source), Xla Wt + sia1 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1-GR + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + ventx2.1 MO + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + ventx2.1 MO + DEX + animal cap explant (1 source), Xla Wt + wnt8a + sia1 MO (1 source), Xla Wt + dnbmpr1a + sia1 MO + sia2 MO (1 source)

Experiments (Reagents)

These are short form descriptions of experiments using reagents targeting the gene of interest.

Xla Wt + sia1 MO + sia2 MO (7 sources), Xla Wt + sia1 (2 sources), Xla Wt + sia1 MO (2 sources), Xla Wt + sia1 MO + sia2 MO (2 sources), Xla Wt + sia1 MO + sia2 MO (2 sources), Xla.pigmented(Nasco) + sia1 (2 sources), Xla Wt + cer1del + sia1 (1 source), Xla Wt + lhx1 + otx2 + sia1 MO + sia2 MO (1 source), Xla Wt + myc-sia1 (1 source), Xla Wt + nodal1 + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 (1 source), Xla Wt + sia1 + ctnnb1 MO (1 source), Xla Wt + sia1 + sia2 (1 source), Xla Wt + sia1 + sox17b.2 (1 source), Xla Wt + sia1 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1 MO + sia2 MO (1 source), Xla Wt + sia1-GR + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + CHX + DEX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + ventx2.1 MO + CHX + animal cap explant (1 source), Xla Wt + sia1-GR + ventx1.1 MO + ventx2.1 MO + DEX + animal cap explant (1 source), Xla Wt + wnt8a + sia1 MO (1 source), Xla Wt + dnbmpr1a + sia1 MO + sia2 MO (1 source)