|
XB-GENEPAGE-5954566
Nucleotide sequences for col5a1 - All
RefSeq mRNAs(7) |
Models - Gene (23) |
Models - mRNA (33) |
mRNAs (11) |
ESTs (101) |
RefSeq mRNAs (7)
Accession | Version | name | Length | Protein | Species |
XM_004916645 | XM_004916645.4 | collagen alpha-1(V) chain isoform X1 | 10891 bp | XP_004916702 | X. tropicalis |
XM_012969175 | XM_012969175.3 | collagen alpha-1(V) chain isoform X2 | 10891 bp | XP_012824629 | X. tropicalis |
XM_012969176 | XM_012969176.3 | collagen alpha-1(V) chain isoform X3 | 4933 bp | XP_012824630 | X. tropicalis |
XM_018232589 | XM_018232589.2 | collagen alpha-1(V) chain isoform X2 | 10127 bp | XP_018088078 | X. laevis.S |
XM_041572351 | XM_041572351.1 | XP_041428285.1 collagen alpha-1(V) chain isoform X2 | 10224 bp | XP_041428285 | X. laevis.L |
XM_018229490 | XM_018229490.2 | collagen alpha-1(V) chain isoform X1 | 10224 bp | XP_018084979 | X. laevis.L |
XM_018232588 | XM_018232588.2 | collagen alpha-1(V) chain isoform X1 | 10127 bp | XP_018088077 | X. laevis.S |
Models - Gene (23)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g011019 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g34319 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g37562 | X. laevis.S |
ENSEMBL | 10.0 | col5a1 | X. tropicalis |
JGI | 9.1 | Xelaev18038329m.g | X. laevis.L |
JGI | 9.1 | Xelaev18041554m.g | X. laevis.S |
Xenbase | 9.1 | gene25425 | X. tropicalis |
Xenbase | 9.2 | gene37398 | X. laevis.L |
Xenbase | 9.2 | gene575 | X. laevis.S |
ENSEMBL | 9.1 | col5a1 | X. tropicalis |
JGI | 7.1 | Xetro.H00056 | X. tropicalis |
JGI | 7.2 | Xelaev16012722m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10020987m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10045195m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000022341 | X. tropicalis |
JGI | 4.1 | e_gw1.137.309.1 | X. tropicalis |
JGI | 4.1 | gw1.137.13.1 | X. tropicalis |
JGI | 4.1 | gw1.137.14.1 | X. tropicalis |
JGI | 4.1 | gw1.137.309.1 | X. tropicalis |
JGI | 4.1 | e_gw1.137.13.1 | X. tropicalis |
JGI | 4.1 | e_gw1.137.14.1 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1370024 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_137000024 | X. tropicalis |
mRNAs based on gene models(33)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA054571 | X. tropicalis |
NCBI | 10.1 | XBmRNA64740 | X. laevis.L |
NCBI | 10.1 | XBmRNA70908 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000048340 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000085656 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000083768 | X. tropicalis |
JGI | 9.1 | Xelaev18038329m | X. laevis.L |
JGI | 9.1 | Xelaev18041554m | X. laevis.S |
Xenbase | 9.1 | rna50289 | X. tropicalis |
Xenbase | 9.2 | rna78108 | X. laevis.L |
Xenbase | 9.2 | rna1669 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000085656 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000048340 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000081127 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000083768 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.2 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.3 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.4 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.5 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.6 | X. tropicalis |
JGI | 7.1 | Xetro.H00056.1 | X. tropicalis |
JGI | 7.2 | Xelaev16012722m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10020987m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10045195m | X. laevis.L |
JGI | 4.1 | e_gw1.137.309.1 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000048340 | X. tropicalis |
JGI | 4.1 | e_gw1.137.13.1 | X. tropicalis |
JGI | 4.1 | e_gw1.137.14.1 | X. tropicalis |
JGI | 4.1 | gw1.137.13.1 | X. tropicalis |
JGI | 4.1 | gw1.137.14.1 | X. tropicalis |
JGI | 4.1 | gw1.137.309.1 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1370024 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_137000024 | X. tropicalis |
mRNAs from cDNA libraries (11)
Clone | Accession | Species | Library | Anatomy | Stage |
IMAGE:6997995 | BC087747 | X. tropicalis | |||
IMAGE:7584785 | BC135276 | X. tropicalis | NIH_XGC_tropTad5 | whole organism | NF stage 35 and 36 to NF stage 41 |
XM_012969176 | X. tropicalis | ||||
XM_012969175 | X. tropicalis | ||||
XM_004916645 | X. tropicalis | ||||
IMAGE:4679818 | BC059289 | X. laevis.L | NICHD_XGC_Emb4 | whole organism | NF stage 31 to NF stage 32 |
IMAGE:5541989 | BC043799 | X. laevis.L | NICHD_XGC_Emb4 | whole organism | NF stage 31 to NF stage 32 |
XM_018232589 | X. laevis.S | ||||
XM_018232588 | X. laevis.S | ||||
XM_018229490 | X. laevis.L | ||||
XM_041572351 | X. laevis.L |