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Summary Expression Phenotypes Gene Literature (1) GO Terms (2) Nucleotides (251) Proteins (57) Interactants (230) Wiki
XB-GENEPAGE-972321

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cpsf3 - All

Models - Gene (33)
Models - mRNA (40)
mRNAs (7)
ESTs (131)

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g000525 X. tropicalis
NCBI 10.1 XBXL10_1g24377 X. laevis.L
NCBI 10.1 XBXL10_1g26167 X. laevis.S
ENSEMBL 10.0 cpsf3 X. tropicalis
JGI 9.1 Xelaev18028030m.g X. laevis.L
JGI 9.1 Xelaev18030071m.g X. laevis.S
Xenbase 9.1 gene5189 X. tropicalis
Xenbase 9.2 gene17058 X. laevis.L
Xenbase 9.2 gene18361 X. laevis.S
ENSEMBL 9.1 cpsf3 X. tropicalis
JGI 8.0 Xetrov14021219m.g X. tropicalis
JGI 7.1 Xetro.E00385 X. tropicalis
JGI 7.2 Xelaev16012775m.g X. laevis.L
JGI 6.0 XeXenL6RMv10033282m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008263 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1250002 X. tropicalis
JGI 4.1 gw1.125.108.1 X. tropicalis
JGI 4.1 gw1.125.109.1 X. tropicalis
JGI 4.1 gw1.125.119.1 X. tropicalis
JGI 4.1 e_gw1.125.108.1 X. tropicalis
JGI 4.1 e_gw1.125.109.1 X. tropicalis
JGI 4.1 e_gw1.125.119.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250108 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250109 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250119 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000001 X. tropicalis

Models - mRNA (40)

Source Version Model Species
NCBI 10.0 mRNA002658 X. tropicalis
NCBI 10.1 XBmRNA45644 X. laevis.L
NCBI 10.1 XBmRNA48952 X. laevis.S
ENSEMBL 10.0 ENSXETT00000018123 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072582 X. tropicalis
JGI 9.1 Xelaev18028030m X. laevis.L
JGI 9.1 Xelaev18030071m X. laevis.S
Xenbase 9.1 rna16875 X. tropicalis
Xenbase 9.2 rna49832 X. laevis.L
Xenbase 9.2 rna53640 X. laevis.S
ENSEMBL 9.1 ENSXETT00000018123 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097488 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077821 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094657 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072582 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088980 X. tropicalis
JGI 8.0 Xetrov14021219m X. tropicalis
JGI 7.1 Xetro.E00385.2 X. tropicalis
JGI 7.1 Xetro.E00385.1 X. tropicalis
JGI 7.2 Xelaev16012775m X. laevis.L
JGI 6.0 XeXenL6RMv10033282m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_1250002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000018123 X. tropicalis
JGI 4.1 e_gw1.125.108.1 X. tropicalis
JGI 4.1 e_gw1.125.109.1 X. tropicalis
JGI 4.1 e_gw1.125.119.1 X. tropicalis
JGI 4.1 gw1.125.108.1 X. tropicalis
JGI 4.1 gw1.125.109.1 X. tropicalis
JGI 4.1 gw1.125.119.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250108 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250109 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250119 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000001 X. tropicalis

mRNAs (7)

Clone Accession Species Library Anatomy Stage
NM_001006769 X. tropicalis
TGas065k24 CR761773 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6992971 BC075564 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XM_012962886 X. tropicalis
IMAGE:5073619 BC084286 X. laevis.L
NM_001094809 X. laevis.L
XM_018265928 X. laevis.S

ESTs (131)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8922107 EL836458 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918281 EL831975 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917188 EL830526 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854327 EL815909 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8955653 EL654603 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st92i04 DC189523 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st91i04 DC189297 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO10621 CX959998 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7460 CX941035 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5591 CX937653 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7553286 CX491622 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573457 CX436739 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555776 CX503115 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7736298 DN022662 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7708477 CX961913 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698447 CX930576 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694867 CX923199 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693671 CX920376 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7672102 CX880712 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7522028 CX470627 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA014h21 CR565246 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014i21 CR565116 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k21 CR441293 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr27B16 CN105498 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas117c15 AL957467 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n11 AL773754 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038m24 AL651688 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043i11 AL651454 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas016i11 AL631183 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025l09 AL627771 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas001g18 AL594767 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA044c16 BX735233 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu138m18 AL798064 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094l07 AL786944 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104h20 AL786176 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077c09 AL779963 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076b13 AL778658 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas065k24 AL674914 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065a14 AL674850 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu035i24 AL657318 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027d01 AL641066 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7029134 CF781521 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:6992971 CF241509 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6991416 CF240655 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6987692 CF220947 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6983926 CF152422 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5379275 BQ523182 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5383640 BQ396127 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383056 BQ394856 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5309046 BQ391636 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8922107 EL836459 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918281 EL831976 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917188 EL830527 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854327 EL815910 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst94i04 DC159983 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst94b14 DC159871 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst92i04 DC159460 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst92h04 DC159444 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst91i04 DC159232 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst23i05 DC139660 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO10621 CX959997 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7460 CX941034 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5591 CX937652 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7708477 CX961912 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698447 CX930575 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672102 CX880711 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7736298 DN022661 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7694867 CX923198 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693671 CX920375 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7522028 CX470626 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573457 CX436738 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA014h21 CR565247 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014i21 CR565117 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k21 CR441294 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7091116 CN323465 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr27B16 CN105497 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas117c15 BX753179 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n11 BX751236 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065k24 BX746254 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065a14 BX746114 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA044c16 BX735234 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu104h20 BX691738 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076b13 BX685613 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077c09 BX685250 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991416 CF240654 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6991801 CF240184 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5379275 BQ523181 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5383640 BQ396126 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383056 BQ394855 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5309046 BQ391635 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl299i09 DC122887 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl309p01 DC126009 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl286j03 DC119326 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl319l22 DC128900 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl319j22 DC128858 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk143e06ex DC049558 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk121j18ex DC042514 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3d03ex DC053666 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8823779 EG578833 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:7977527 DR723040 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL442a14ex BP683124 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL469c14ex BP692640 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL405p18ex BP689928 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429h04ex BP678314 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL426f20ex BP677273 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL419d03ex BP675261 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998A019030 BX847669 5' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XL101i21 BJ074318 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106f18 BJ068309 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL006m16 BJ031316 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6932065 CB941634 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3747720 BE680331 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
PBX0156C09 AW645791 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0007H01 AW633449 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl277e12 DC081820 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl309p01 DC090984 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl319l22 DC093172 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl319j22 DC093129 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl299i09 DC088038 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk130a12ex DC012103 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk143e06ex DC016263 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk121j18ex DC009456 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8823779 EG585914 3' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL469c14ex BP726953 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL405p18ex BP724615 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404p18ex BP721840 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429h04ex BP715338 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL419d03ex BP712743 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL101i21 BJ091759 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106f18 BJ085575 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25