Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (9) Nucleotides (95) Proteins (46) Interactants (68) Wiki
XB-GENEPAGE-956388

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chm - All

RefSeq mRNAs(3)
Models - Gene (24)
Models - mRNA (33)
mRNAs (5)
ESTs (14)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002938547 XM_002938547.5 rab proteins geranylgeranyltransferase component A 1 2307 bp XP_002938593 X. tropicalis
NM_001090193 NM_001090193.1 choroideremia 2267 bp NP_001083662 X. laevis.L
XM_018233059 XM_018233059.2 rab proteins geranylgeranyltransferase component A 2 2331 bp XP_018088548 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g38075 X. laevis.S
NCBI 10.1 XBXL10_1g35215 X. laevis.L
NCBI 10.0 XBXT10g013568 X. tropicalis
ENSEMBL 10.0 chm X. tropicalis
Xenbase 9.2 gene41504 X. laevis.S
Xenbase 9.2 gene34395 X. laevis.L
JGI 9.1 Xelaev18038916m.g X. laevis.L
JGI 9.1 Xelaev18042254m.g X. laevis.S
Xenbase 9.1 gene27963 X. tropicalis
ENSEMBL 9.1 chm X. tropicalis
JGI 7.2 Xelaev16021798m.g X. laevis.L
JGI 7.2 Xelaev16046299m.g X. laevis.S
JGI 7.1 Xetro.H00739 X. tropicalis
JGI 6.0 XeXenL6RMv10044063m.g X. laevis.S
JGI 6.0 XeXenL6RMv10036735m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017820 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_384000021 X. tropicalis
JGI 4.1 e_gw1.384.27.1 X. tropicalis
JGI 4.1 e_gw1.384.26.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_384000005 X. tropicalis
JGI 4.1 gw1.384.34.1 X. tropicalis
JGI 4.1 gw1.384.27.1 X. tropicalis
JGI 4.1 gw1.384.26.1 X. tropicalis
JGI 4.1 e_gw1.384.34.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA71954 X. laevis.S
NCBI 10.1 XBmRNA66479 X. laevis.L
ENSEMBL 10.0 ENSXETT00000102933 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071532 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082796 X. tropicalis
NCBI 10.0 mRNA067147 X. tropicalis
Xenbase 9.2 rna73953 X. laevis.L
Xenbase 9.2 rna83969 X. laevis.S
ENSEMBL 9.1 ENSXETT00000084594 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090723 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101931 X. tropicalis
JGI 9.1 Xelaev18042254m X. laevis.S
ENSEMBL 9.1 ENSXETT00000102933 X. tropicalis
ENSEMBL 9.1 ENSXETT00000038634 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071532 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082796 X. tropicalis
Xenbase 9.1 rna54287 X. tropicalis
JGI 9.1 Xelaev18038916m X. laevis.L
JGI 7.2 Xelaev16046299m X. laevis.S
JGI 7.2 Xelaev16021798m X. laevis.L
JGI 7.1 Xetro.H00739.2 X. tropicalis
JGI 7.1 Xetro.H00739.1 X. tropicalis
JGI 6.0 XeXenL6RMv10036735m X. laevis.L
JGI 6.0 XeXenL6RMv10044063m X. laevis.S
JGI 4.1 gw1.384.26.1 X. tropicalis
JGI 4.1 e_gw1.384.27.1 X. tropicalis
JGI 4.1 e_gw1.384.34.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038634 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_384000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_384000005 X. tropicalis
JGI 4.1 e_gw1.384.26.1 X. tropicalis
JGI 4.1 gw1.384.27.1 X. tropicalis
JGI 4.1 gw1.384.34.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
XM_002938547 X. tropicalis
IMAGE:4031682 BC061662 X. laevis.L
NM_001090193 X. laevis.L
IMAGE:4963633 BC078011 X. laevis.S
XM_018233059 X. laevis.S

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7855298 DT397675 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7616928 CX361721 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617837 CX362298 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607161 CX367562 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663712 CX847500 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665597 CX850611 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7855298 DT397674 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7616928 CX361720 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663712 CX847499 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7617837 CX362297 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607161 DR894336 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL424e18ex BP676908 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4783497 BM191919 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3745445 BE679025 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)