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Summary Expression Phenotypes Gene Literature (1) GO Terms (23) Nucleotides (102) Proteins (60) Interactants (32) Wiki
XB-GENEPAGE-5968393

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nisch - All

RefSeq mRNAs(11)
Models - Gene (25)
Models - mRNA (31)
mRNAs (13)
ESTs (14)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
NM_001130345 NM_001130345.1 nischarin 4227 bp NP_001123817 X. tropicalis
XM_031899900 XM_031899900.1 XP_031755760.1 nischarin isoform X1 4719 bp XP_031755760 X. tropicalis
XM_031899901 XM_031899901.1 XP_031755761.1 nischarin isoform X2 4453 bp XP_031755761 X. tropicalis
XM_031899902 XM_031899902.1 XP_031755762.1 nischarin isoform X3 3732 bp XP_031755762 X. tropicalis
XM_031899903 XM_031899903.1 XP_031755763.1 nischarin isoform X4 4292 bp XP_031755763 X. tropicalis
XM_031899904 XM_031899904.1 XP_031755764.1 nischarin isoform X5 4012 bp XP_031755764 X. tropicalis
XM_031899905 XM_031899905.1 XP_031755765.1 nischarin isoform X6 2135 bp XP_031755765 X. tropicalis
NM_001097740 NM_001097740.1 nischarin S homeolog 1734 bp NP_001091209 X. laevis.S
XM_018240910 XM_018240910.2 nischarin S homeolog isoform X1 5156 bp XP_018096399 X. laevis.S
XM_018240911 XM_018240911.2 nischarin S homeolog isoform X3 2804 bp XP_018096400 X. laevis.S
XM_041591101 XM_041591101.1 XP_041447035.1 nischarin S homeolog isoform X2 1843 bp XP_041447035 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g22481 X. laevis.S
NCBI 10.0 XBXT10g018949 X. tropicalis
ENSEMBL 10.0 nisch X. tropicalis
Xenbase 9.2 gene45114 X. laevis.S
JGI 9.1 Xelaev18002619m.g X. laevis.S
Xenbase 9.1 gene16619 X. tropicalis
ENSEMBL 9.1 nisch X. tropicalis
JGI 7.2 Xelaev16035084m.g X. laevis.S
JGI 7.1 Xetro.K02376 X. tropicalis
JGI 6.0 XeXenL6RMv10035517m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021467 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1024000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240009 X. tropicalis
JGI 4.1 e_gw1.1024.2.1 X. tropicalis
JGI 4.1 e_gw1.1024.28.1 X. tropicalis
JGI 4.1 e_gw1.1024.50.1 X. tropicalis
JGI 4.1 e_gw1.1024.9.1 X. tropicalis
JGI 4.1 gw1.1024.2.1 X. tropicalis
JGI 4.1 gw1.1024.28.1 X. tropicalis
JGI 4.1 gw1.1024.50.1 X. tropicalis
JGI 4.1 gw1.1024.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10240002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10240002 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA41854 X. laevis.S
ENSEMBL 10.0 ENSXETT00000046415 X. tropicalis
NCBI 10.0 mRNA093687 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105960 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119767 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120868 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124085 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124414 X. tropicalis
Xenbase 9.2 rna89340 X. laevis.S
Xenbase 9.1 rna36354 X. tropicalis
JGI 9.1 Xelaev18002619m X. laevis.S
ENSEMBL 9.1 ENSXETT00000046415 X. tropicalis
JGI 7.2 Xelaev16035084m X. laevis.S
JGI 7.1 Xetro.K02376.1 X. tropicalis
JGI 6.0 XeXenL6RMv10035517m X. laevis.S
JGI 4.1 e_gw1.1024.50.1 X. tropicalis
JGI 4.1 e_gw1.1024.28.1 X. tropicalis
JGI 4.1 e_gw1.1024.2.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046415 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046414 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1024000002 X. tropicalis
JGI 4.1 gw1.1024.2.1 X. tropicalis
JGI 4.1 gw1.1024.28.1 X. tropicalis
JGI 4.1 gw1.1024.50.1 X. tropicalis
JGI 4.1 gw1.1024.9.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240028 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10240002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10240009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10240002 X. tropicalis
JGI 4.1 e_gw1.1024.9.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7693868 BC167624 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001130345 X. tropicalis
XM_031899900 X. tropicalis
XM_031899901 X. tropicalis
XM_031899902 X. tropicalis
XM_031899903 X. tropicalis
XM_031899904 X. tropicalis
XM_031899905 X. tropicalis
IMAGE:8463101 BC129758 X. laevis.S
NM_001097740 X. laevis.S
XM_018240910 X. laevis.S
XM_018240911 X. laevis.S
XM_041591101 X. laevis.S

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAN12170 CX928646 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693868 CX921466 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8862963 EL706037 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8930877 EL665222 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8954418 EL653731 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8947648 EG656351 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7649796 CX810066 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7693868 CX921465 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8862963 EL706036 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8930877 EL665221 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
XL174m10 BJ615861 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7298421 CO386938 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
za62e09 AW159232 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
XL174m10 BJ632476 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5