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Summary Expression Phenotypes Gene Literature (2) GO Terms (25) Nucleotides (157) Proteins (67) Interactants (126) Wiki
XB-GENEPAGE-999797

Show:     All X. tropicalis X. laevis

Nucleotide sequences for strn3 - All

RefSeq mRNAs(10)
Models - Gene (28)
Models - mRNA (43)
mRNAs (14)
ESTs (38)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_001374830 NM_001374830.2 NP_001361759.1 striatin-3 3666 bp NP_001361759 X. tropicalis
XM_031890549 XM_031890549.1 XP_031746409.1 striatin-3 isoform X1 4570 bp XP_031746409 X. tropicalis
XM_031890551 XM_031890551.1 XP_031746411.1 striatin-3 isoform X2 4549 bp XP_031746411 X. tropicalis
XM_031890552 XM_031890552.1 XP_031746412.1 striatin-3 isoform X3 4458 bp XP_031746412 X. tropicalis
NM_001093514 NM_001093514.1 striatin 3 L homeolog 4102 bp NP_001086983 X. laevis.L
XM_041572049 XM_041572049.1 XP_041427983.1 striatin 3 L homeolog isoform X1 3320 bp XP_041427983 X. laevis.L
XM_041572050 XM_041572050.1 XP_041427984.1 striatin 3 L homeolog isoform X2 3317 bp XP_041427984 X. laevis.L
XM_018232185 XM_018232185.2 striatin-3 isoform X1 4427 bp XP_018087674 X. laevis.S
XM_018232186 XM_018232186.2 striatin-3 isoform X2 4429 bp XP_018087675 X. laevis.S
XM_018232187 XM_018232187.2 striatin-3 isoform X3 4308 bp XP_018087676 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g36170 X. laevis.L
NCBI 10.1 XBXL10_1g37104 X. laevis.S
NCBI 10.0 XBXT10g011632 X. tropicalis
ENSEMBL 10.0 strn3 X. tropicalis
Xenbase 9.2 gene4988 X. laevis.S
Xenbase 9.2 gene35874 X. laevis.L
JGI 9.1 Xelaev18041002m.g X. laevis.S
JGI 9.1 Xelaev18040015m.g X. laevis.L
Xenbase 9.1 gene31028 X. tropicalis
ENSEMBL 9.1 strn3 X. tropicalis
JGI 7.2 Xelaev16049717m.g X. laevis.L
JGI 7.1 Xetro.H01804 X. tropicalis
JGI 6.0 XeXenL6RMv10008435m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014156 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_37000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_37000036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_370011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370199 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370178 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370125 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_370023 X. tropicalis
JGI 4.1 gw1.37.199.1 X. tropicalis
JGI 4.1 gw1.37.178.1 X. tropicalis
JGI 4.1 gw1.37.125.1 X. tropicalis
JGI 4.1 e_gw1.37.199.1 X. tropicalis
JGI 4.1 e_gw1.37.178.1 X. tropicalis
JGI 4.1 e_gw1.37.125.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_370034 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA68470 X. laevis.L
NCBI 10.1 XBmRNA69973 X. laevis.S
ENSEMBL 10.0 ENSXETT00000085465 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066067 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088644 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071442 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075781 X. tropicalis
ENSEMBL 10.0 ENSXETT00000030912 X. tropicalis
NCBI 10.0 mRNA057772 X. tropicalis
Xenbase 9.2 rna75995 X. laevis.L
Xenbase 9.2 rna14574 X. laevis.S
ENSEMBL 9.1 ENSXETT00000073421 X. tropicalis
ENSEMBL 9.1 ENSXETT00000030912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066067 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071442 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075781 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083520 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085465 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091251 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097426 X. tropicalis
Xenbase 9.1 rna59180 X. tropicalis
JGI 9.1 Xelaev18040015m X. laevis.L
JGI 9.1 Xelaev18041002m X. laevis.S
JGI 7.2 Xelaev16049717m X. laevis.L
JGI 7.1 Xetro.H01804.2 X. tropicalis
JGI 7.1 Xetro.H01804.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008435m X. laevis.L
JGI 4.1 gw1.37.125.1 X. tropicalis
JGI 4.1 gw1.37.178.1 X. tropicalis
JGI 4.1 gw1.37.199.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_370034 X. tropicalis
JGI 4.1 e_gw1.37.199.1 X. tropicalis
JGI 4.1 e_gw1.37.125.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030912 X. tropicalis
JGI 4.1 e_gw1.37.178.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_370011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_370023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370178 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370125 X. tropicalis
JGI 4.1 estExt_Genewise1.C_370199 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_37000036 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_37000013 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7666532 BC121868 X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA005d21 CU075318 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
NM_001078994 X. tropicalis
NM_001374830 X. tropicalis
XM_031890549 X. tropicalis
XM_031890551 X. tropicalis
XM_031890552 X. tropicalis
IMAGE:5440248 BC077858 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093514 X. laevis.L
XM_041572049 X. laevis.L
XM_041572050 X. laevis.L
XM_018232185 X. laevis.S
XM_018232186 X. laevis.S
XM_018232187 X. laevis.S

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas125m20 AL956837 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5382235 BQ393307 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
st98i17 DC192368 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA005d21 CR415111 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7560853 CX463850 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7793417 CX846532 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7666532 CX853082 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:9018173 EL866302 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7092801 CK655273 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas077l07 AL774210 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087e07 AL955636 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7560853 CX463849 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7793417 CX846531 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9018173 EL866303 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst98i17 DC162390 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA005d21 CR415112 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XL188o19 BJ619358 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk58j10ex DC035187 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL049m03 BJ039532 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL198i18 BJ621752 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998P168087 BX855474 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:8533183 EB477042 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:7983375 DR729457 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7297584 CO383828 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
AW871954 AW871954 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
IMAGE:6635591 BU909879 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3550149 BG578103 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:5440248 CF287928 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5541836 BQ733921 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL049m03 BJ054256 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL188o19 BJ635989 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198i18 BJ638457 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205g18 BJ640245 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk118n05ex DC008703 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3301887 BF072015 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL001n19 BJ055626 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
AW782668 AW782668 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
IMAGE:3550149 BG555590 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26