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Summary Expression Phenotypes Gene Literature (13) GO Terms (9) Nucleotides (140) Proteins (37) Interactants (38) Wiki
XB-GENEPAGE-6492079

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for shroom1 - All

Models - Gene (20)
Models - mRNA (21)
mRNAs (11)
ESTs (53)

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g002905 X. tropicalis
NCBI 10.1 XBXL10_1g12273 X. laevis.L
ENSEMBL 10.0 shroom1 X. tropicalis
Xenbase 9.1 gene480 X. tropicalis
Xenbase 9.2 gene97 X. laevis.L
ENSEMBL 9.1 shroom1 X. tropicalis
JGI 8.0 Xetrov14015371m.g X. tropicalis
JGI 7.1 Xetro.C01330 X. tropicalis
JGI 7.2 Xelaev16023790m.g X. laevis.L
JGI 6.0 XeXenL6RMv10022478m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004167 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1390007 X. tropicalis
JGI 4.1 gw1.139.91.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1390010 X. tropicalis
JGI 4.1 e_gw1.139.91.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1390091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1390015 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_139000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_139000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_139000007 X. tropicalis

Models - mRNA (21)

Source Version Model Species
NCBI 10.0 mRNA014739 X. tropicalis
NCBI 10.1 XBmRNA22939 X. laevis.L
ENSEMBL 10.0 ENSXETT00000009035 X. tropicalis
Xenbase 9.1 rna1484 X. tropicalis
Xenbase 9.2 rna270 X. laevis.L
ENSEMBL 9.1 ENSXETT00000069670 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009035 X. tropicalis
JGI 8.0 Xetrov14015371m X. tropicalis
JGI 7.1 Xetro.C01330.1 X. tropicalis
JGI 7.2 Xelaev16023790m X. laevis.L
JGI 6.0 XeXenL6RMv10022478m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_1390007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009035 X. tropicalis
JGI 4.1 e_gw1.139.91.1 X. tropicalis
JGI 4.1 gw1.139.91.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1390010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1390091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1390015 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_139000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_139000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_139000007 X. tropicalis

mRNAs (11)

Clone Accession Species Library Anatomy Stage
TEgg028d08 CT030081 X. tropicalis
IMAGE:7687813 BC161390 X. tropicalis NIH_XGC_tropTe4 testis frog
XM_002935260 X. tropicalis
XM_004912832 X. tropicalis
XM_004912831 X. tropicalis
Apx Z14997 X. laevis.L
IMAGE:6630857 BC077265 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001090687 X. laevis.L
IMAGE:9093940 BC170553 X. laevis.L
XM_041585027 X. laevis.L
XM_041585026 X. laevis.L

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas050n09 AL653020 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAN11003 CX926479 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7593575 CX330321 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8958862 EL652813 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8957645 EL660413 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7659336 CX839286 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687001 CX908282 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687813 CX909662 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690373 CX914777 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692525 CX918284 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698042 CX930057 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7660765 CX841690 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas046a10 AL652240 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144p24 AL957622 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7584801 CX415701 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7526431 CX443569 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551087 CX510120 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas132a14 AL969188 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6982008 CF226095 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982008 CF226096 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TNeu026k10 AL641204 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7687001 CX908281 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687813 CX909661 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698042 CX930056 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11003 CX926478 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7660765 CX841689 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7690373 CX914776 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692525 CX918283 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659336 CX839285 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas132a14 BX758964 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144p24 BX761788 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7593575 CX330320 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7526431 CX443568 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551087 CX510119 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6630857 BU905922 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5157312 CA793527 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6931788 CB941783 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL095f19 BJ071747 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL219e16 BJ627768 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL485l16ex BP698763 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8538371 EB462570 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8644732 EB728938 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0067H01 AW638248 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0076B06 AW638905 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0096A08 AW640519 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0096H01 AW640593 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3300392 BE026247 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3401650 BE679329 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3744024 BF427013 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0040D03 AW635936 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL095f19 BJ088863 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3744024 BG016579 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0004F01 AW633174 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage