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Summary Expression Phenotypes Gene Literature (2) GO Terms (12) Nucleotides (72) Proteins (35) Interactants (21) Wiki
XB-GENEPAGE-5725031

Show:     All X. tropicalis X. laevis

Nucleotide sequences for opn7b - All

RefSeq mRNAs(3)
Models - Gene (20)
Models - mRNA (21)
mRNAs (7)
ESTs (14)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001079378 NM_001079378.1 uncharacterized protein LOC780307 1580 bp NP_001072846 X. tropicalis
XM_018234925 XM_018234925.2 opsin-5 1854 bp XP_018090414 X. laevis.L
XM_018238167 XM_018238167.2 opsin-5 2337 bp XP_018093656 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g39305 X. laevis.L
NCBI 10.1 XBXL10_1g42496 X. laevis.S
NCBI 10.0 XBXT10g018992 X. tropicalis
ENSEMBL 10.0 opn7b X. tropicalis
Xenbase 9.2 gene13471 X. laevis.S
Xenbase 9.2 gene18297 X. laevis.L
JGI 9.1 Xelaev18046172m.g X. laevis.S
JGI 9.1 Xelaev18043439m.g X. laevis.L
Xenbase 9.1 gene5880 X. tropicalis
ENSEMBL 9.1 opn7b X. tropicalis
JGI 7.1 Xetro.J00384 X. tropicalis
JGI 6.0 XeXenL6RMv10045204m.g X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_48000021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_48000007 X. tropicalis
JGI 4.1 gw1.48.70.1 X. tropicalis
JGI 4.1 e_gw1.48.68.1 X. tropicalis
JGI 4.1 gw1.48.68.1 X. tropicalis
JGI 4.1 e_gw1.48.71.1 X. tropicalis
JGI 4.1 gw1.48.71.1 X. tropicalis
JGI 4.1 e_gw1.48.70.1 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.1 XBmRNA79881 X. laevis.S
NCBI 10.1 XBmRNA74075 X. laevis.L
ENSEMBL 10.0 ENSXETT00000112312 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060725 X. tropicalis
NCBI 10.0 mRNA093893 X. tropicalis
Xenbase 9.2 rna53448 X. laevis.L
Xenbase 9.2 rna39192 X. laevis.S
Xenbase 9.1 rna19008 X. tropicalis
JGI 9.1 Xelaev18043439m X. laevis.L
JGI 9.1 Xelaev18046172m X. laevis.S
ENSEMBL 9.1 ENSXETT00000060725 X. tropicalis
JGI 7.1 Xetro.J00384.1 X. tropicalis
JGI 6.0 XeXenL6RMv10045204m X. laevis.L
JGI 4.1 gw1.48.71.1 X. tropicalis
JGI 4.1 e_gw1.48.70.1 X. tropicalis
JGI 4.1 e_gw1.48.71.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_48000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_48000021 X. tropicalis
JGI 4.1 gw1.48.68.1 X. tropicalis
JGI 4.1 gw1.48.70.1 X. tropicalis
JGI 4.1 e_gw1.48.68.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7863009 BC122055 X. tropicalis
IMAGE:7585053 BC135116 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TEgg028f17 CT030287 X. tropicalis
NM_001079378 X. tropicalis
XM_018234925 X. laevis.L
MN820857 X. laevis.S
XM_018238167 X. laevis.S

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7805615 DR841767 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7532119 CX432779 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552662 CX495347 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555875 CX503457 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585053 CX317719 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO2779 CX933244 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7532119 CX432778 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7805615 DR841766 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7555875 CX503456 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585053 CX317718 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7552662 CX495346 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO2779 CX933243 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:6937052 CD099285 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6940181 CD100448 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage