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Summary Expression Phenotypes Gene Literature (398) GO Terms (14) Nucleotides (229) Proteins (58) Interactants (1740) Wiki
XB-GENEPAGE-479317

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for notch1 - All

Models - Gene (30)
Models - mRNA (42)
mRNAs (6)
ESTs (123)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g006018 X. tropicalis
NCBI 10.1 XBXL10_1g37549 X. laevis.S
NCBI 10.1 XBXL10_1g34304 X. laevis.L
ENSEMBL 10.0 notch1 X. tropicalis
JGI 9.1 Xelaev18041536m.g X. laevis.S
JGI 9.1 Xelaev18038316m.g X. laevis.L
Xenbase 9.1 gene25244 X. tropicalis
Xenbase 9.2 gene49280 X. laevis.S
Xenbase 9.2 gene48394 X. laevis.L
ENSEMBL 9.1 notch1 X. tropicalis
JGI 8.0 Xetrov14008481m.g X. tropicalis
JGI 7.1 Xetro.H00047 X. tropicalis
JGI 7.2 Xelaev16055762m.g X. laevis.S
JGI 6.0 XeXenL6RMv10039967m.g X. laevis.S
JGI 6.0 XeXenL6RMv10055170m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000757 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370040 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370044 X. tropicalis
JGI 4.1 e_gw1.137.133.1 X. tropicalis
JGI 4.1 e_gw1.137.307.1 X. tropicalis
JGI 4.1 e_gw1.137.308.1 X. tropicalis
JGI 4.1 gw1.137.133.1 X. tropicalis
JGI 4.1 gw1.137.307.1 X. tropicalis
JGI 4.1 gw1.137.308.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370133 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370307 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370308 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000011 X. tropicalis

Models - mRNA (42)

Source Version Model Species
NCBI 10.0 mRNA029757 X. tropicalis
NCBI 10.1 XBmRNA64720 X. laevis.L
NCBI 10.1 XBmRNA70889 X. laevis.S
ENSEMBL 10.0 ENSXETT00000061458 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086829 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001676 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090537 X. tropicalis
JGI 9.1 Xelaev18038316m X. laevis.L
JGI 9.1 Xelaev18041536m X. laevis.S
Xenbase 9.1 rna49990 X. tropicalis
Xenbase 9.2 rna93973 X. laevis.L
Xenbase 9.2 rna95198 X. laevis.S
ENSEMBL 9.1 ENSXETT00000072959 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103255 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097915 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001676 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090537 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086829 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097315 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061458 X. tropicalis
JGI 8.0 Xetrov14008481m X. tropicalis
JGI 7.1 Xetro.H00047.1 X. tropicalis
JGI 7.2 Xelaev16055762m X. laevis.S
JGI 6.0 XeXenL6RMv10039967m X. laevis.S
JGI 6.0 XeXenL6RMv10055170m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_1370040 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001676 X. tropicalis
JGI 4.1 e_gw1.137.133.1 X. tropicalis
JGI 4.1 e_gw1.137.307.1 X. tropicalis
JGI 4.1 e_gw1.137.308.1 X. tropicalis
JGI 4.1 gw1.137.133.1 X. tropicalis
JGI 4.1 gw1.137.307.1 X. tropicalis
JGI 4.1 gw1.137.308.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370133 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370307 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370308 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000011 X. tropicalis

mRNAs (6)

Clone Accession Species Library Anatomy Stage
TGas033n19 CT027958 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7675042 BC133053 X. tropicalis
NM_001097288 X. tropicalis
M33874 X. laevis.S
NM_001087605 X. laevis.S
XM_018229488 X. laevis.L

ESTs (123)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9010336 EL855021 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922662 EL837029 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8932387 EL668136 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st76m13 DC185687 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21i13 DC169253 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st36d17 DC173652 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st33e02 DC172842 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st116o23 DC193683 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7576582 CX432121 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7603143 CX394472 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596212 CX336999 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559001 CX498718 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557204 CX505648 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7754929 DN056937 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7718423 CX980786 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7692630 CX919403 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7649633 CX809936 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7518678 CX750952 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7514623 CX744306 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
THdA052l22 CR585647 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA029c12 CR581546 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006c12 CR576138 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA024k02 CR571138 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA013k16 CR565881 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014l13 CR565275 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003b13 CR562510 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA011g02 CR562130 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007h06 CR561103 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA048j16 CR448871 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA049h04 CR422010 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr03L18 CN120207 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr03L18 CN113734 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr03D14 CN113667 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr33B19 CN109312 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas108o18 AL969883 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110d02 AL962848 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040l15 AL653950 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029k07 AL652797 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033n19 AL648638 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA036c15 BX734922 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu102n20 AL803299 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu100l17 AL803188 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133d23 AL799562 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119i05 AL793485 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099e13 AL790210 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098i08 AL790143 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094g14 AL787268 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082b09 AL780072 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076l19 AL778712 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053k06 AL674449 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu041j03 AL661239 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu011c16 AL639784 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu011d05 AL639602 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9010336 EL855022 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922662 EL837030 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8932387 EL668135 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8868717 EL708503 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst36d17 DC143397 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst34e02 DC142853 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst33e02 DC142579 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst21i13 DC139074 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7559001 CX498717 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7649633 CX809935 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7754929 DN056936 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7718423 CX980785 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7692630 CX919402 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7518678 CX750951 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7514623 CX744305 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7557204 CX505647 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576582 CX432120 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7596212 CX336998 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA052l22 CR585648 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032e10 CR577970 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA013k16 CR565882 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014l13 CR565276 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007h06 CR561104 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA048j16 CR448872 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA049h04 CR422011 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas108o18 BX754072 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA036c15 BX734923 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA058l22 BX729264 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu098i08 BX694744 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102n20 BX694406 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099e13 BX692097 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076l19 BX685147 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053k06 BX684487 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl240m05 DC105955 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl302e18 DC123749 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl310b02 DC126051 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl244a02 DC106966 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl242j10 DC106526 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl270m19 DC114963 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238p15 DC105399 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl293l17 DC121334 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk157d05ex DC063190 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk63e12ex DC055277 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3p22ex DC053924 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk112k21ex DC039655 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
p12c3 AU245161 5' X. laevis.S Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13