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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (222) Proteins (55) Interactants (64) Wiki
XB-GENEPAGE-1011575

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ddx54 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (19)
Models - mRNA (30)
mRNAs (3)
ESTs (78)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002934334 XM_002934334.5 ATP-dependent RNA helicase DDX54 isoform X1 3293 bp XP_002934380 X. tropicalis
XM_018089863 XM_018089863.2 ATP-dependent RNA helicase DDX54 isoform X2 3066 bp XP_017945352 X. tropicalis

Models - Gene (19)

Source Version Model Species
NCBI 10.0 XBXT10g019341 X. tropicalis
ENSEMBL 10.0 ddx54 X. tropicalis
Xenbase 9.1 gene8475 X. tropicalis
ENSEMBL 9.1 ddx54 X. tropicalis
JGI 8.0 Xetrov14002005m.g X. tropicalis
JGI 7.1 Xetro.A01015 X. tropicalis
ENSEMBL 4.1 ENSXETG00000016410 X. tropicalis
JGI 4.1 e_gw1.91.151.1 X. tropicalis
JGI 4.1 e_gw1.91.257.1 X. tropicalis
JGI 4.1 e_gw1.91.319.1 X. tropicalis
JGI 4.1 C_scaffold_91000002 X. tropicalis
JGI 4.1 gw1.91.257.1 X. tropicalis
JGI 4.1 gw1.91.319.1 X. tropicalis
JGI 4.1 gw1.91.151.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000007 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA095545 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096724 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035818 X. tropicalis
Xenbase 9.1 rna27420 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081375 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096724 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070044 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091333 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075443 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094719 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089098 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035818 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073196 X. tropicalis
JGI 8.0 Xetrov14002005m X. tropicalis
JGI 7.1 Xetro.A01015.3 X. tropicalis
JGI 7.1 Xetro.A01015.2 X. tropicalis
JGI 7.1 Xetro.A01015.1 X. tropicalis
JGI 4.1 C_scaffold_91000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035818 X. tropicalis
JGI 4.1 e_gw1.91.151.1 X. tropicalis
JGI 4.1 e_gw1.91.257.1 X. tropicalis
JGI 4.1 e_gw1.91.319.1 X. tropicalis
JGI 4.1 gw1.91.257.1 X. tropicalis
JGI 4.1 gw1.91.319.1 X. tropicalis
JGI 4.1 gw1.91.151.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000007 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
TNeu064n23 CR760446 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002934334 X. tropicalis
XM_018089863 X. tropicalis

ESTs (78)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8857718 EL821158 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8925754 EL671926 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st75k13 DC185392 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st74k13 DC185129 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st73k13 DC184876 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st40f09 DC176795 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39f09 DC176524 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7633754 CX375346 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596020 CX336486 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7743274 DN036334 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7571731 CX513114 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7803736 DR838694 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7802432 DR836614 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7801472 DR834585 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7519313 CX478743 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA007n14 CR561163 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA078j06 CR440486 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA068g18 CR426728 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA052e16 CR426287 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA052e04 CR426277 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062c08 CR425017 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA067d16 CR424782 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA010n19 CR413273 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA064l19 CR412776 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04N09 CN120466 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04N10 CN118019 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04N09 CN117871 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr28K22 CN105867 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas090n24 AL964025 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106c22 AL963706 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074n24 AL782461 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas045m12 AL652222 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas023p09 AL627963 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA046l09 BX745413 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA038a11 BX736375 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu102i21 AL805322 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu139k17 AL799256 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079e02 AL784708 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064n23 AL783544 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058n04 AL674376 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991401 CF263967 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6977178 CF223894 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976421 CF223199 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6988624 CF220173 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5383243 BQ395287 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5307390 BQ388448 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
L1G3b8 AL643736 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8909842 EL805180 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8925754 EL671925 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7803736 DR838693 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7802432 DR836613 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7801472 DR834584 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7752811 DN052979 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7743274 DN036333 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7710953 CX966677 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7669905 CX876738 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7571731 CX513113 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519313 CX478742 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA007n14 CR561164 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA052e16 CR426288 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062c08 CR425018 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA067d16 CR424783 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060f18 CR423404 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04N10 CN118018 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04N09 CN117870 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr28K22 CN105866 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas090n24 BX764183 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106c22 BX756014 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090n22 BX751634 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074n24 BX750448 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA046l09 BX745414 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA046l08 BX730266 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu102i21 BX694337 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079e02 BX685941 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058n04 BX684149 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991401 CF263968 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383243 BQ395286 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5307390 BQ388447 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13