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Summary Expression Phenotypes Gene Literature (3) GO Terms (17) Nucleotides (230) Proteins (54) Interactants (56) Wiki
XB-GENEPAGE-1014310

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cop1 - All

RefSeq mRNAs(6)
Models - Gene (23)
Models - mRNA (33)
mRNAs (10)
ESTs (115)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001016199 NM_001016199.2 E3 ubiquitin-protein ligase COP1 2913 bp NP_001016199 X. tropicalis
XM_012961071 XM_012961071.3 E3 ubiquitin-protein ligase COP1 isoform X1 3265 bp XP_012816525 X. tropicalis
XM_018258478 XM_018258478.2 E3 ubiquitin-protein ligase COP1 isoform X2 3728 bp XP_018113967 X. laevis.L
XM_018258479 XM_018258479.2 E3 ubiquitin-protein ligase COP1 isoform X1 3727 bp XP_018113968 X. laevis.L
XM_018260946 XM_018260946.2 E3 ubiquitin-protein ligase COP1 isoform X1 3001 bp XP_018116435 X. laevis.S
XM_018260947 XM_018260947.2 E3 ubiquitin-protein ligase COP1 isoform X2 2998 bp XP_018116436 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g19315 X. laevis.L
NCBI 10.1 XBXL10_1g21758 X. laevis.S
NCBI 10.0 XBXT10g012124 X. tropicalis
ENSEMBL 10.0 cop1 X. tropicalis
Xenbase 9.2 gene1075 X. laevis.S
Xenbase 9.2 gene4234 X. laevis.L
JGI 9.1 Xelaev18025319m.g X. laevis.S
JGI 9.1 Xelaev18023241m.g X. laevis.L
Xenbase 9.1 gene33212 X. tropicalis
ENSEMBL 9.1 cop1 X. tropicalis
JGI 8.0 Xetrov14019414m.g X. tropicalis
JGI 7.2 Xelaev16061144m.g X. laevis.L
JGI 7.1 Xetro.D02039 X. tropicalis
JGI 6.0 XeXenL6RMv10000571m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009192 X. tropicalis
JGI 4.1 e_gw1.1.102.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000217 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000033 X. tropicalis
JGI 4.1 gw1.1.64.1 X. tropicalis
JGI 4.1 gw1.1.418.1 X. tropicalis
JGI 4.1 gw1.1.102.1 X. tropicalis
JGI 4.1 e_gw1.1.64.1 X. tropicalis
JGI 4.1 e_gw1.1.418.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA35692 X. laevis.L
NCBI 10.1 XBmRNA40351 X. laevis.S
ENSEMBL 10.0 ENSXETT00000079198 X. tropicalis
NCBI 10.0 mRNA060069 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081240 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089042 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112890 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114570 X. tropicalis
ENSEMBL 10.0 ENSXETT00000020180 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073439 X. tropicalis
Xenbase 9.2 rna3127 X. laevis.S
Xenbase 9.2 rna12321 X. laevis.L
ENSEMBL 9.1 ENSXETT00000020180 X. tropicalis
Xenbase 9.1 rna62717 X. tropicalis
JGI 9.1 Xelaev18023241m X. laevis.L
ENSEMBL 9.1 ENSXETT00000089042 X. tropicalis
JGI 9.1 Xelaev18025319m X. laevis.S
ENSEMBL 9.1 ENSXETT00000073439 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079198 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081240 X. tropicalis
JGI 8.0 Xetrov14019414m X. tropicalis
JGI 7.2 Xelaev16061144m X. laevis.L
JGI 7.1 Xetro.D02039.1 X. tropicalis
JGI 6.0 XeXenL6RMv10000571m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_1000217 X. tropicalis
JGI 4.1 e_gw1.1.418.1 X. tropicalis
JGI 4.1 e_gw1.1.64.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020180 X. tropicalis
JGI 4.1 e_gw1.1.102.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000033 X. tropicalis
JGI 4.1 gw1.1.102.1 X. tropicalis
JGI 4.1 gw1.1.418.1 X. tropicalis
JGI 4.1 gw1.1.64.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:9039936 BC170678 X. tropicalis
TEgg024k15 CR926346 X. tropicalis
NM_001016199 X. tropicalis
XM_012961071 X. tropicalis
IMAGE:5537244 BC161699 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018258478 X. laevis.L
XM_018258479 X. laevis.L
IMAGE:5073365 BC130067 X. laevis.S
XM_018260946 X. laevis.S
XM_018260947 X. laevis.S

ESTs (115)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas092p13 AL966065 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137e09 AL968575 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7703055 CX938910 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7689831 CX913254 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687353 CX909101 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs12M20 CN076797 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7612546 CX405028 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611966 CX404429 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7523918 CX438159 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552468 CX495326 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu004m24 AL640146 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7639724 CX385795 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629932 CX369562 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4461579 BG815934 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xthr05E10 CN118259 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8916776 EL830078 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854473 EL816448 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7708185 CX961175 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st85g04 DC187820 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st86g04 DC188052 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st96e24 DC190417 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6988945 CF219881 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7586963 CX312920 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA048b15 BX734949 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025l12 BX734853 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026b06 BX719665 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009e17 BX709159 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA042h22 CR584604 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017j06 CR568563 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7518328 CX750347 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TNeu132e22 AL800393 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068k24 AL783365 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061o11 AL673868 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu007l19 AL642455 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas025d14 AL629915 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas058o20 AL682288 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076p13 AL774153 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109d17 AL956706 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110j03 AL960026 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136m06 AL963476 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7689831 CX913253 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:4461579 BG816508 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst85g04 DC157676 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst86g04 DC157929 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst96e24 DC160417 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas076n13 BX750153 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076p13 BX750185 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136m06 BX759823 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137e09 BX759939 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092p13 BX764284 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7523918 CX438158 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu061o11 BX684890 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068k24 BX687211 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu132e22 BX700955 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7518328 CX750346 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
THdA017j06 CR568564 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA009e17 BX709160 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026b06 BX719666 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025l12 BX734854 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA048b15 BX734950 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7629932 CX369561 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639724 CX385794 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611966 CX404428 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612546 CX405027 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs12M20 CN076796 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7687353 CX909100 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7703055 CX938909 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7708185 CX961174 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8854473 EL816449 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916776 EL830079 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr05E10 CN118258 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XL046l21 BJ040526 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL215l23 BJ626717 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5537244 BQ731456 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL189c06 BJ619408 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3300433 BE026293 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL159c10 BJ612419 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3378217 BE506274 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL142n05 BJ093564 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3401744 BE679398 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3378198 BE506234 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7298984 CO384349 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL078n10 BJ064250 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6870780 CA982158 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
xl239g04 DC105524 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL468i13ex BP692437 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3751193 BG345699 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:8527510 EB469981 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6324027 CA972331 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4085636 BI449183 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:4085635 BI449250 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL099g10 BJ072666 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL045g11 BJ038761 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3742924 BE679680 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL046l21 BJ054904 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL170m09 BJ631810 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL045g11 BJ050719 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3378198 BE189080 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4958055 BI315376 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL172m09 BJ632231 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4085636 BI447461 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL467j14ex BP726506 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL468i13ex BP726758 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3742924 BE678513 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL152b12 BJ100270 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL083l10 BJ082983 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL142n05 BJ097745 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl239g04 DC071249 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4085635 BI447478 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3300433 BE026993 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3751193 BG023332 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL215l23 BJ643078 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3401744 BE575940 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3378217 BE189156 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage