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Summary Expression Phenotypes Gene Literature (24) GO Terms (1) Nucleotides (69) Proteins (36) Interactants (316) Wiki
XB-GENEPAGE-484662

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for prrx1 - All

RefSeq mRNAs(6)
Models - Gene (18)
Models - mRNA (18)
mRNAs (6)
ESTs (17)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
XM_002933755 XM_002933755. paired mesoderm homeobox protein 1 isoform X2 1938 bp XP_002933801 X. tropicalis
XM_004913782 XM_004913782.3 paired mesoderm homeobox protein 1 isoform X1 4199 bp XP_004913839 X. tropicalis
XM_018258780 XM_018258780.2 paired mesoderm homeobox protein 1 isoform X1 4169 bp XP_018114269 X. laevis.L
XM_018258781 XM_018258781.2 paired mesoderm homeobox protein 1 isoform X2 1684 bp XP_018114270 X. laevis.L
XM_018261168 XM_018261168.2 paired mesoderm homeobox protein 1 isoform X1 2385 bp XP_018116657 X. laevis.S
XM_018261169 XM_018261169.2 paired mesoderm homeobox protein 1 isoform X2 1613 bp XP_018116658 X. laevis.S

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g003074 X. tropicalis
NCBI 10.1 XBXL10_1g19634 X. laevis.L
NCBI 10.1 XBXL10_1g21977 X. laevis.S
ENSEMBL 10.0 prrx1 X. tropicalis
Xenbase 9.1 gene518 X. tropicalis
ENSEMBL 9.1 prrx1 X. tropicalis
JGI 7.1 Xetro.D01389 X. tropicalis
JGI 6.0 XeXenL6RMv10009796m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004727 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_69000034 X. tropicalis
JGI 4.1 e_gw1.69.145.1 X. tropicalis
JGI 4.1 e_gw1.69.258.1 X. tropicalis
JGI 4.1 e_gw1.69.40.1 X. tropicalis
JGI 4.1 gw1.69.145.1 X. tropicalis
JGI 4.1 gw1.69.258.1 X. tropicalis
JGI 4.1 gw1.69.40.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000123 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000124 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
NCBI 10.0 mRNA015619 X. tropicalis
NCBI 10.1 XBmRNA36330 X. laevis.L
NCBI 10.1 XBmRNA40827 X. laevis.S
ENSEMBL 10.0 ENSXETT00000010247 X. tropicalis
Xenbase 9.1 rna1601 X. tropicalis
ENSEMBL 9.1 ENSXETT00000010247 X. tropicalis
JGI 7.1 Xetro.D01389.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009796m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_69000034 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010247 X. tropicalis
JGI 4.1 e_gw1.69.145.1 X. tropicalis
JGI 4.1 e_gw1.69.258.1 X. tropicalis
JGI 4.1 e_gw1.69.40.1 X. tropicalis
JGI 4.1 gw1.69.145.1 X. tropicalis
JGI 4.1 gw1.69.258.1 X. tropicalis
JGI 4.1 gw1.69.40.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000123 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000124 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002933755 X. tropicalis
XM_004913782 X. tropicalis
XM_018261169 X. laevis.S
XM_018261168 X. laevis.S
XM_018258781 X. laevis.L
XM_018258780 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA003k10 CR561813 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7631891 CX397616 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8939373 EL642883 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8889772 EL849219 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6999143 CF344609 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999143 CF344610 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TTpA063b21 BX718995 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA063d02 BX721876 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7092580 CK655687 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr38N16 CN112600 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA003k10 CR561814 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8939373 EL642882 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8889772 EL849220 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA063d02 BX721877 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5570405 BQ734720 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL086p15 BJ066708 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086p15 BJ084043 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25