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Summary Expression Phenotypes Gene Literature (2) GO Terms (16) Nucleotides (123) Proteins (53) Interactants (27) Wiki
XB-GENEPAGE-488048

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tubd1 - All

RefSeq mRNAs(2)
Models - Gene (29)
Models - mRNA (31)
mRNAs (5)
ESTs (37)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001006746 NM_001006746.1 tubulin delta chain 1705 bp NP_001006747 X. tropicalis
NM_001087678 NM_001087678.1 tubulin delta 1 L homeolog 2107 bp NP_001081147 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g7409 X. laevis.L
NCBI 10.0 XBXT10g000230 X. tropicalis
ENSEMBL 10.0 ENSXETG00000010735 X. tropicalis
Xenbase 9.2 gene12814 X. laevis.L
JGI 9.1 Xelaev18012649m.g X. laevis.L
Xenbase 9.1 gene7342 X. tropicalis
ENSEMBL 9.1 ENSXETG00000010735 X. tropicalis
JGI 8.0 Xetrov14008674m.g X. tropicalis
JGI 7.2 Xelaev16011236m.g X. laevis.L
JGI 7.1 Xetro.B00305 X. tropicalis
JGI 6.0 XeXenL6RMv10007642m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010735 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_720074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_720032 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_72000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000074 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_720027 X. tropicalis
JGI 4.1 e_gw1.72.149.1 X. tropicalis
JGI 4.1 e_gw1.72.150.1 X. tropicalis
JGI 4.1 e_gw1.72.32.1 X. tropicalis
JGI 4.1 gw1.72.149.1 X. tropicalis
JGI 4.1 gw1.72.150.1 X. tropicalis
JGI 4.1 gw1.72.32.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_720046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_720147 X. tropicalis
JGI 4.1 estExt_Genewise1.C_720148 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_720017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_720073 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA13966 X. laevis.L
ENSEMBL 10.0 ENSXETT00000023482 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108440 X. tropicalis
NCBI 10.0 mRNA001186 X. tropicalis
Xenbase 9.2 rna37246 X. laevis.L
Xenbase 9.1 rna23724 X. tropicalis
JGI 9.1 Xelaev18012649m X. laevis.L
ENSEMBL 9.1 ENSXETT00000023482 X. tropicalis
JGI 8.0 Xetrov14008674m X. tropicalis
JGI 7.2 Xelaev16011236m X. laevis.L
JGI 7.1 Xetro.B00305.2 X. tropicalis
JGI 7.1 Xetro.B00305.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007642m X. laevis.L
JGI 4.1 estExt_Genewise1.C_720032 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_720046 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_720027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_720074 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_720073 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_720017 X. tropicalis
JGI 4.1 e_gw1.72.32.1 X. tropicalis
JGI 4.1 e_gw1.72.150.1 X. tropicalis
JGI 4.1 e_gw1.72.149.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023482 X. tropicalis
JGI 4.1 gw1.72.32.1 X. tropicalis
JGI 4.1 gw1.72.150.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000074 X. tropicalis
JGI 4.1 gw1.72.149.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000073 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_72000017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_720148 X. tropicalis
JGI 4.1 estExt_Genewise1.C_720147 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:6989654 BC075514 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001006746 X. tropicalis
AF430839 X. laevis.L
IMAGE:6871585 BC090240 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001087678 X. laevis.L

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6989654 CF219589 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TTpA020o08 BX712307 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
CAAO10496 CX959768 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:6989654 CF219590 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8915465 EL828143 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8852919 EL825105 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7751593 DN051195 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7720802 CX995752 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas120e08 AL973311 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA041n21 BX742521 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7791473 DR906100 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7667086 CX853602 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA020o08 BX712308 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8915465 EL828144 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA041n21 BX742522 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7791473 CX324942 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas120e08 BX757130 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7667086 CX853601 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7720802 CX995751 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:3743915 BF427425 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:6325879 CA973596 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6867226 CA982674 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6871585 CA983308 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
BG410147 BG410147 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
XL188g14 BJ619197 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL194i22 BJ620776 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL215i13 BJ626645 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
AW765297 AW765297 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
AW765319 AW765319 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
XL072n10 BJ061393 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL215i13 BJ643015 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL208n13 BJ641074 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL194i22 BJ637480 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188g14 BJ635845 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3743915 BG016765 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL072n10 BJ079584 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
AW764668 AW764668 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24