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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (130) Proteins (57) Interactants (17) Wiki
XB-GENEPAGE-5727594

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cdk5rap1 - All

RefSeq mRNAs(9)
Models - Gene (31)
Models - mRNA (33)
mRNAs (13)
ESTs (11)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001017192 NM_001017192.2 mitochondrial tRNA methylthiotransferase CDK5RAP1 2111 bp NP_001017192 X. tropicalis
XM_012971799 XM_012971799.3 CDK5 regulatory subunit-associated protein 1 isoform X2 2103 bp XP_012827253 X. tropicalis
XM_012971798 XM_012971798.3 CDK5 regulatory subunit-associated protein 1 isoform X1 2137 bp XP_012827252 X. tropicalis
XM_012971800 XM_012971800.2 CDK5 regulatory subunit-associated protein 1 isoform X2 2158 bp XP_012827254 X. tropicalis
XM_031894129 XM_031894129.1 XP_031749989.1 CDK5 regulatory subunit-associated protein 1 isoform X2 1986 bp XP_031749989 X. tropicalis
NM_001097030 NM_001097030.1 CDK5 regulatory subunit associated protein 1 L homeolog 1970 bp NP_001090499 X. laevis.L
XM_018234662 XM_018234662.2 CDK5 regulatory subunit associated protein 1 L homeolog isoform X2 1914 bp XP_018090151 X. laevis.L
XM_018234661 XM_018234661.2 CDK5 regulatory subunit associated protein 1 L homeolog isoform X1 1992 bp XP_018090150 X. laevis.L
XM_018234660 XM_018234660.2 CDK5 regulatory subunit associated protein 1 L homeolog isoform X1 2038 bp XP_018090149 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g014890 X. tropicalis
NCBI 10.1 XBXL10_1g39769 X. laevis.L
ENSEMBL 10.0 cdk5rap1 X. tropicalis
JGI 9.1 Xelaev18043796m.g X. laevis.L
Xenbase 9.1 gene2425 X. tropicalis
Xenbase 9.2 gene18826 X. laevis.L
ENSEMBL 9.1 cdk5rap1 X. tropicalis
JGI 8.0 Xetrov14040966m.g X. tropicalis
JGI 7.1 Xetro.J00408 X. tropicalis
JGI 7.2 Xelaev16048413m.g X. laevis.L
JGI 6.0 XeXenL6RMv10006034m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004314 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_317000002 X. tropicalis
JGI 4.1 e_gw1.317.1.1 X. tropicalis
JGI 4.1 e_gw1.317.23.1 X. tropicalis
JGI 4.1 e_gw1.317.50.1 X. tropicalis
JGI 4.1 gw1.317.1.1 X. tropicalis
JGI 4.1 gw1.317.23.1 X. tropicalis
JGI 4.1 gw1.317.50.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3170009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170050 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3170004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3170025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3170026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3170007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_317000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_317000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_317000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_317000007 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA073645 X. tropicalis
NCBI 10.1 XBmRNA74824 X. laevis.L
ENSEMBL 10.0 ENSXETT00000009381 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085644 X. tropicalis
JGI 9.1 Xelaev18043796m X. laevis.L
Xenbase 9.1 rna8053 X. tropicalis
Xenbase 9.2 rna54952 X. laevis.L
ENSEMBL 9.1 ENSXETT00000085644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009381 X. tropicalis
JGI 8.0 Xetrov14040966m X. tropicalis
JGI 7.1 Xetro.J00408.1 X. tropicalis
JGI 7.2 Xelaev16048413m X. laevis.L
JGI 6.0 XeXenL6RMv10006034m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_317000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009381 X. tropicalis
JGI 4.1 e_gw1.317.1.1 X. tropicalis
JGI 4.1 e_gw1.317.23.1 X. tropicalis
JGI 4.1 e_gw1.317.50.1 X. tropicalis
JGI 4.1 gw1.317.1.1 X. tropicalis
JGI 4.1 gw1.317.23.1 X. tropicalis
JGI 4.1 gw1.317.50.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3170009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3170050 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3170004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3170025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3170026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3170007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_317000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_317000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_317000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_317000007 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
NM_001017192 X. tropicalis
IMAGE:7732723 BC123043 X. tropicalis
TEgg054g12 CR760597 X. tropicalis
IMAGE:7760395 BC155386 X. tropicalis
XM_012971799 X. tropicalis
XM_012971798 X. tropicalis
XM_012971800 X. tropicalis
XM_031894129 X. tropicalis
IMAGE:8329007 BC123344 X. laevis.L
NM_001097030 X. laevis.L
XM_018234662 X. laevis.L
XM_018234661 X. laevis.L
XM_018234660 X. laevis.L

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA045e22 BX727477 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7655104 CX825346 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7749211 DN046073 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7854672 DT396956 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8859705 EL823938 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA045e22 BX727478 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7655104 CX825345 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7854672 DT396955 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8859705 EL823939 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
XL101g08 BJ073828 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL101g08 BJ090078 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25