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XB-GENEPAGE-5727594
Nucleotide sequences for cdk5rap1 - All
RefSeq mRNAs(9) |
Models - Gene (31) |
Models - mRNA (33) |
mRNAs (13) |
ESTs (11) |
RefSeq mRNAs (9)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001017192 | NM_001017192.2 | mitochondrial tRNA methylthiotransferase CDK5RAP1 | 2111 bp | NP_001017192 | X. tropicalis |
XM_012971799 | XM_012971799.3 | CDK5 regulatory subunit-associated protein 1 isoform X2 | 2103 bp | XP_012827253 | X. tropicalis |
XM_012971798 | XM_012971798.3 | CDK5 regulatory subunit-associated protein 1 isoform X1 | 2137 bp | XP_012827252 | X. tropicalis |
XM_012971800 | XM_012971800.2 | CDK5 regulatory subunit-associated protein 1 isoform X2 | 2158 bp | XP_012827254 | X. tropicalis |
XM_031894129 | XM_031894129.1 | XP_031749989.1 CDK5 regulatory subunit-associated protein 1 isoform X2 | 1986 bp | XP_031749989 | X. tropicalis |
NM_001097030 | NM_001097030.1 | CDK5 regulatory subunit associated protein 1 L homeolog | 1970 bp | NP_001090499 | X. laevis.L |
XM_018234662 | XM_018234662.2 | CDK5 regulatory subunit associated protein 1 L homeolog isoform X2 | 1914 bp | XP_018090151 | X. laevis.L |
XM_018234661 | XM_018234661.2 | CDK5 regulatory subunit associated protein 1 L homeolog isoform X1 | 1992 bp | XP_018090150 | X. laevis.L |
XM_018234660 | XM_018234660.2 | CDK5 regulatory subunit associated protein 1 L homeolog isoform X1 | 2038 bp | XP_018090149 | X. laevis.L |
Models - Gene (31)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g014890 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g39769 | X. laevis.L |
ENSEMBL | 10.0 | cdk5rap1 | X. tropicalis |
JGI | 9.1 | Xelaev18043796m.g | X. laevis.L |
Xenbase | 9.1 | gene2425 | X. tropicalis |
Xenbase | 9.2 | gene18826 | X. laevis.L |
ENSEMBL | 9.1 | cdk5rap1 | X. tropicalis |
JGI | 8.0 | Xetrov14040966m.g | X. tropicalis |
JGI | 7.1 | Xetro.J00408 | X. tropicalis |
JGI | 7.2 | Xelaev16048413m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10006034m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000004314 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_317000002 | X. tropicalis |
JGI | 4.1 | e_gw1.317.1.1 | X. tropicalis |
JGI | 4.1 | e_gw1.317.23.1 | X. tropicalis |
JGI | 4.1 | e_gw1.317.50.1 | X. tropicalis |
JGI | 4.1 | gw1.317.1.1 | X. tropicalis |
JGI | 4.1 | gw1.317.23.1 | X. tropicalis |
JGI | 4.1 | gw1.317.50.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_3170009 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170001 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170023 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170050 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_3170004 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_3170025 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_3170026 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_3170007 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_317000004 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_317000025 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_317000026 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_317000007 | X. tropicalis |
mRNAs based on gene models(33)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA073645 | X. tropicalis |
NCBI | 10.1 | XBmRNA74824 | X. laevis.L |
ENSEMBL | 10.0 | ENSXETT00000009381 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000085644 | X. tropicalis |
JGI | 9.1 | Xelaev18043796m | X. laevis.L |
Xenbase | 9.1 | rna8053 | X. tropicalis |
Xenbase | 9.2 | rna54952 | X. laevis.L |
ENSEMBL | 9.1 | ENSXETT00000085644 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000009381 | X. tropicalis |
JGI | 8.0 | Xetrov14040966m | X. tropicalis |
JGI | 7.1 | Xetro.J00408.1 | X. tropicalis |
JGI | 7.2 | Xelaev16048413m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10006034m | X. laevis.L |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_317000002 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000009381 | X. tropicalis |
JGI | 4.1 | e_gw1.317.1.1 | X. tropicalis |
JGI | 4.1 | e_gw1.317.23.1 | X. tropicalis |
JGI | 4.1 | e_gw1.317.50.1 | X. tropicalis |
JGI | 4.1 | gw1.317.1.1 | X. tropicalis |
JGI | 4.1 | gw1.317.23.1 | X. tropicalis |
JGI | 4.1 | gw1.317.50.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_3170009 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170001 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170023 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_3170050 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_3170004 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_3170025 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_3170026 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_3170007 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_317000004 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_317000025 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_317000026 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_317000007 | X. tropicalis |
mRNAs from cDNA libraries (13)
Clone | Accession | Species | Library | Anatomy | Stage |
NM_001017192 | X. tropicalis | ||||
IMAGE:7732723 | BC123043 | X. tropicalis | |||
TEgg054g12 | CR760597 | X. tropicalis | |||
IMAGE:7760395 | BC155386 | X. tropicalis | |||
XM_012971799 | X. tropicalis | ||||
XM_012971798 | X. tropicalis | ||||
XM_012971800 | X. tropicalis | ||||
XM_031894129 | X. tropicalis | ||||
IMAGE:8329007 | BC123344 | X. laevis.L | |||
NM_001097030 | X. laevis.L | ||||
XM_018234662 | X. laevis.L | ||||
XM_018234661 | X. laevis.L | ||||
XM_018234660 | X. laevis.L |
ESTs (11)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
TTpA045e22 | BX727477 | 5' | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
IMAGE:7655104 | CX825346 | 5' | X. tropicalis | NIH_XGC_tropBrn3 | brain | frog |
IMAGE:7749211 | DN046073 | 5' | X. tropicalis | NIH_XGC_tropKid1 | mesonephric kidney | frog |
IMAGE:7854672 | DT396956 | 5' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
IMAGE:8859705 | EL823938 | 5' | X. tropicalis | NICHD_XGC_tropTe1 | testis | frog |
TTpA045e22 | BX727478 | 3' | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
IMAGE:7655104 | CX825345 | 3' | X. tropicalis | NIH_XGC_tropBrn3 | brain | frog |
IMAGE:7854672 | DT396955 | 3' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
IMAGE:8859705 | EL823939 | 3' | X. tropicalis | NICHD_XGC_tropTe1 | testis | frog |
XL101g08 | BJ073828 | 5' | X. laevis.L | NIBB Mochii normalized Xenopus tailbud library | whole organism | NF stage 25 |
XL101g08 | BJ090078 | 3' | X. laevis.L | NIBB Mochii normalized Xenopus tailbud library | whole organism | NF stage 25 |