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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (282) Proteins (50) Interactants (7) Wiki
XB-GENEPAGE-5744242

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for yrdc - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (33)
mRNAs (7)
ESTs (133)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001015837 NM_001015837.1 threonylcarbamoyl-AMP synthase 1526 bp NP_001015837 X. tropicalis
NM_001089029 NM_001089029.1 yrdC N6-threonylcarbamoyltransferase domain containing L homeolog 1273 bp NP_001082498 X. laevis.L
XM_018249544 XM_018249544.2 yrdC domain-containing protein, mitochondrial 1246 bp XP_018105033 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g015902 X. tropicalis
NCBI 10.1 XBXL10_1g7263 X. laevis.L
NCBI 10.1 XBXL10_1g10078 X. laevis.S
ENSEMBL 10.0 yrdc X. tropicalis
JGI 9.1 Xelaev18012493m.g X. laevis.L
JGI 9.1 Xelaev18015178m.g X. laevis.S
Xenbase 9.1 gene4340 X. tropicalis
Xenbase 9.2 gene10374 X. laevis.L
Xenbase 9.2 gene20535 X. laevis.S
ENSEMBL 9.1 yrdc X. tropicalis
JGI 8.0 Xetrov14007631m.g X. tropicalis
JGI 7.1 Xetro.B00150 X. tropicalis
JGI 7.2 Xelaev16041382m.g X. laevis.L
JGI 6.0 XeXenL6RMv10015156m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014420 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_492000001 X. tropicalis
JGI 4.1 e_gw1.492.26.1 X. tropicalis
JGI 4.1 e_gw1.492.39.1 X. tropicalis
JGI 4.1 e_gw1.492.40.1 X. tropicalis
JGI 4.1 gw1.492.26.1 X. tropicalis
JGI 4.1 gw1.492.39.1 X. tropicalis
JGI 4.1 gw1.492.40.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4920003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920040 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4920001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4920006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4920007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4920003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_492000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_492000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_492000003 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA078736 X. tropicalis
NCBI 10.1 XBmRNA13680 X. laevis.L
NCBI 10.1 XBmRNA18839 X. laevis.S
ENSEMBL 10.0 ENSXETT00000031540 X. tropicalis
JGI 9.1 Xelaev18012493m X. laevis.L
JGI 9.1 Xelaev18015178m X. laevis.S
Xenbase 9.1 rna14147 X. tropicalis
Xenbase 9.2 rna30154 X. laevis.L
Xenbase 9.2 rna59954 X. laevis.S
ENSEMBL 9.1 ENSXETT00000031540 X. tropicalis
JGI 8.0 Xetrov14007631m X. tropicalis
JGI 7.1 Xetro.B00150.1 X. tropicalis
JGI 7.2 Xelaev16041382m X. laevis.L
JGI 6.0 XeXenL6RMv10015156m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_492000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031540 X. tropicalis
JGI 4.1 e_gw1.492.26.1 X. tropicalis
JGI 4.1 e_gw1.492.39.1 X. tropicalis
JGI 4.1 e_gw1.492.40.1 X. tropicalis
JGI 4.1 gw1.492.26.1 X. tropicalis
JGI 4.1 gw1.492.39.1 X. tropicalis
JGI 4.1 gw1.492.40.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4920003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4920040 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4920001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4920006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4920007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4920003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_492000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_492000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_492000003 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
NM_001015837 X. tropicalis
IMAGE:6991305 BC090125 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5514319 BC073618 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6867262 BC088928 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4889124 BC045238 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
NM_001089029 X. laevis.L
XM_018249544 X. laevis.S

ESTs (133)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu099h14 AL787011 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7632900 CX374050 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636846 CX406802 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8879 CX956776 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8953908 EL654554 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7566032 CX483033 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532008 CX432357 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532815 CX433890 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534272 CX428361 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540851 CX461986 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544785 CX486765 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552707 CX495003 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577233 CX422640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7594820 CX332356 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7720314 CX994993 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7739551 DN028671 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7558514 CX497687 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562260 CX466272 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564316 CX475172 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071c23 CR423629 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023g07 CR435370 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062k05 CR450166 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA017l19 CR568461 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017l22 CR568594 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas097d04 AL971019 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas124n24 AL972115 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7091485 CK654197 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr01L17 CN119501 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA012g14 CR409798 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu131d20 AL795771 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA075a12 BX729669 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas032c19 AL648315 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas050e10 AL653061 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas042n08 AL650812 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas118l14 AL967148 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379371 BQ523757 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas141k10 AL964547 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6991305 CF264046 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu030j17 AL656389 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas051l23 AL675835 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8879 CX956775 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7534272 CX428360 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558514 CX497686 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7720314 CX994992 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7739551 DN028670 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7632900 DR901498 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7562260 CX466271 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7594820 CX332355 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636846 CX406801 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577233 CX422639 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532008 CX432356 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532815 CX433889 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540851 CX461985 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564316 CX475171 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566032 CX483032 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544785 CX486764 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552707 CX495002 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA007f07 CR410318 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA071c23 CR423630 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023g07 CR435371 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062k05 CR450167 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA017l19 CR568462 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017l22 CR568595 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas097d04 BX754713 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas118l14 BX759368 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141i10 BX765002 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7091485 CN327361 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA012g14 CR409799 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu099h14 BX692146 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101l14 BX694448 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu131d20 BX702004 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas051l23 BX746433 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4462043 BG885470 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:5379371 BQ523756 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379705 BQ523785 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6991305 CF264047 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xl280b15 DC117578 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl326l22 DC131075 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266o22 DC113832 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl337h13 DC134193 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL487p16ex BP699526 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL461l17ex BP690507 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7975242 DR724228 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
xlk128i22ex DC044783 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk159f20ex DC063877 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL171k02 BJ615348 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL210c15 BJ624983 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998J178246 BX852980 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL415o01ex BP674136 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7295632 CO383184 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7299736 CO383608 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6325553 CA973366 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6870635 CA982046 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6870503 CA982956 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6879806 CB207409 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5514319 CF286998 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL063b19 BJ059601 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL064b19 BJ059859 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4059882 BG018705 5' X. laevis.L Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26