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Summary Expression Phenotypes Gene Literature (3) GO Terms (7) Nucleotides (142) Proteins (46) Interactants (83) Wiki
XB-GENEPAGE-5866460

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pcdh10 - All

RefSeq mRNAs(4)
Models - Gene (29)
Models - mRNA (31)
mRNAs (8)
ESTs (55)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001079015 NM_001079015.1 protocadherin-10 precursor 3870 bp NP_001072483 X. tropicalis
XM_012965336 XM_012965336.3 protocadherin-10 isoform X1 5440 bp XP_012820790 X. tropicalis
XM_018231833 XM_018231833.2 protocadherin-10 5333 bp XP_018087322 X. laevis.L
XM_018243308 XM_018243308.2 protocadherin-10 5348 bp XP_018098797 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g3987 X. laevis.S
NCBI 10.1 XBXL10_1g1072 X. laevis.L
NCBI 10.0 XBXT10g000473 X. tropicalis
ENSEMBL 10.0 pcdh10 X. tropicalis
Xenbase 9.2 gene41338 X. laevis.S
Xenbase 9.2 gene3393 X. laevis.L
JGI 9.1 Xelaev18009301m.g X. laevis.S
JGI 9.1 Xelaev18005582m.g X. laevis.L
Xenbase 9.1 gene18266 X. tropicalis
ENSEMBL 9.1 pcdh10 X. tropicalis
JGI 7.1 Xetro.A02775 X. tropicalis
JGI 6.0 XeXenL6RMv10011619m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003663 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_16000072 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_16000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_16000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_16000071 X. tropicalis
JGI 4.1 gw1.16.114.1 X. tropicalis
JGI 4.1 gw1.16.163.1 X. tropicalis
JGI 4.1 gw1.16.22.1 X. tropicalis
JGI 4.1 e_gw1.16.163.1 X. tropicalis
JGI 4.1 e_gw1.16.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_160033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160163 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_160069 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_160016 X. tropicalis
JGI 4.1 e_gw1.16.114.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA7282 X. laevis.S
NCBI 10.1 XBmRNA1666 X. laevis.L
ENSEMBL 10.0 ENSXETT00000063876 X. tropicalis
ENSEMBL 10.0 ENSXETT00000007904 X. tropicalis
NCBI 10.0 mRNA002465 X. tropicalis
Xenbase 9.2 rna83740 X. laevis.S
Xenbase 9.2 rna9877 X. laevis.L
JGI 9.1 Xelaev18009301m X. laevis.S
ENSEMBL 9.1 ENSXETT00000063876 X. tropicalis
Xenbase 9.1 rna38901 X. tropicalis
JGI 9.1 Xelaev18005582m X. laevis.L
ENSEMBL 9.1 ENSXETT00000007904 X. tropicalis
JGI 7.1 Xetro.A02775.1 X. tropicalis
JGI 6.0 XeXenL6RMv10011619m X. laevis.L
JGI 4.1 gw1.16.114.1 X. tropicalis
JGI 4.1 gw1.16.163.1 X. tropicalis
JGI 4.1 gw1.16.22.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_16000072 X. tropicalis
JGI 4.1 e_gw1.16.163.1 X. tropicalis
JGI 4.1 e_gw1.16.22.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007904 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_160069 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_160016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_160033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_160163 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_16000071 X. tropicalis
JGI 4.1 e_gw1.16.114.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_16000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_16000018 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7659279 BC121910 X. tropicalis NIH_XGC_tropBrn3 brain frog
NM_001079015 X. tropicalis
XM_012965336 X. tropicalis
XR_001171056 X. tropicalis
XM_018231833 X. laevis.L
XR_001932848 X. laevis.L
XM_018243308 X. laevis.S
XR_001934120 X. laevis.S

ESTs (55)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7661665 CX843037 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7647808 CX806874 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648453 CX807712 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7660761 CX841663 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7648905 CX808524 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7659279 CX838881 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7649759 CX809816 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7656555 CX827567 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7649775 CX809928 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655753 CX826251 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651192 CX812780 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7694330 CX922415 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7651739 CX813229 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640958 CX794293 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7687149 CX908318 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7641157 CX794688 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7672409 CX880848 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7642344 CX797342 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA037g22 CR577304 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7642742 CX797777 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7741668 DN032638 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7645389 CX802286 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7663102 CX846201 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646623 CX804240 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651192 CX812779 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA037g22 CR577305 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7640958 CX794292 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641157 CX794687 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642344 CX797341 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642742 CX797776 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645389 CX802285 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646623 CX804239 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647808 CX806873 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648905 CX808523 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649759 CX809815 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649775 CX809927 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651739 CX813228 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655753 CX826250 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656555 CX827566 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659279 CX838880 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660761 CX841662 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661665 CX843036 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7672409 CX880847 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7694330 CX922414 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7741668 DN032637 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGp998I038734 BX842955 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3581258 BG730345 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
za43f02 AW158633 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
BM928974 BM928974 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
XL015n11 BJ032172 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL010o03 BJ028960 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015p09 BJ032204 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3581258 BG552501 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
XL010o03 BJ043709 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015p09 BJ047239 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15