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Summary Expression Phenotypes Gene Literature (1) GO Terms (13) Nucleotides (153) Proteins (56) Interactants (192) Wiki
XB-GENEPAGE-5897109

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pus3 - All

RefSeq mRNAs(9)
Models - Gene (28)
Models - mRNA (34)
mRNAs (13)
ESTs (38)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_203638 NM_203638.1 tRNA pseudouridine(38/39) synthase 2153 bp NP_988969 X. tropicalis
XM_012970245 XM_012970245.2 tRNA pseudouridine(38/39) synthase isoform X1 2153 bp XP_012825699 X. tropicalis
XM_012970246 XM_012970246.2 tRNA pseudouridine(38/39) synthase isoform X2 2146 bp XP_012825700 X. tropicalis
XM_012970247 XM_012970247.3 tRNA pseudouridine(38/39) synthase isoform X2 2127 bp XP_012825701 X. tropicalis
XM_018097064 XM_018097064.2 tRNA pseudouridine(38/39) synthase isoform X2 2137 bp XP_017952553 X. tropicalis
NM_001099900 NM_001099900.1 pseudouridine synthase 3 L homeolog 2511 bp NP_001093370 X. laevis.L
XM_018233900 XM_018233900.2 pseudouridine synthase 3 L homeolog isoform X1 3018 bp XP_018089389 X. laevis.L
XM_018233901 XM_018233901.2 pseudouridine synthase 3 L homeolog isoform X2 2613 bp XP_018089390 X. laevis.L
XM_018233902 XM_018233902.2 pseudouridine synthase 3 L homeolog isoform X2 2679 bp XP_018089391 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g41484 X. laevis.L
NCBI 10.0 XBXT10g008459 X. tropicalis
ENSEMBL 10.0 pus3 X. tropicalis
Xenbase 9.2 gene43339 X. laevis.L
JGI 9.1 Xelaev18045628m.g X. laevis.L
Xenbase 9.1 gene3753 X. tropicalis
ENSEMBL 9.1 pus3 X. tropicalis
JGI 8.0 Xetrov14050806m.g X. tropicalis
JGI 7.2 Xelaev16080121m.g X. laevis.L
JGI 7.1 Xetro.I01622 X. tropicalis
JGI 6.0 XeXenL6RMv10024542m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024532 X. tropicalis
JGI 4.1 e_gw1.645.4.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_645000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000028 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450021 X. tropicalis
JGI 4.1 e_gw1.645.68.1 X. tropicalis
JGI 4.1 e_gw1.645.89.1 X. tropicalis
JGI 4.1 gw1.645.4.1 X. tropicalis
JGI 4.1 gw1.645.68.1 X. tropicalis
JGI 4.1 gw1.645.89.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450089 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6450011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450028 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA78283 X. laevis.L
NCBI 10.0 mRNA041927 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052966 X. tropicalis
Xenbase 9.2 rna86691 X. laevis.L
Xenbase 9.1 rna12277 X. tropicalis
JGI 9.1 Xelaev18045628m X. laevis.L
ENSEMBL 9.1 ENSXETT00000052966 X. tropicalis
JGI 8.0 Xetrov14050806m X. tropicalis
JGI 7.2 Xelaev16080121m X. laevis.L
JGI 7.1 Xetro.I01622.5 X. tropicalis
JGI 7.1 Xetro.I01622.1 X. tropicalis
JGI 7.1 Xetro.I01622.2 X. tropicalis
JGI 7.1 Xetro.I01622.3 X. tropicalis
JGI 7.1 Xetro.I01622.4 X. tropicalis
JGI 7.1 Xetro.I01622.6 X. tropicalis
JGI 7.1 Xetro.I01622.7 X. tropicalis
JGI 6.0 XeXenL6RMv10024542m X. laevis.L
JGI 4.1 gw1.645.68.1 X. tropicalis
JGI 4.1 e_gw1.645.68.1 X. tropicalis
JGI 4.1 e_gw1.645.89.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052966 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6450011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450028 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450089 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_645000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000028 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000007 X. tropicalis
JGI 4.1 gw1.645.4.1 X. tropicalis
JGI 4.1 e_gw1.645.4.1 X. tropicalis
JGI 4.1 gw1.645.89.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:5384629 BC061416 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TEgg062e21 CR761247 X. tropicalis
TGas104p08 CR848155 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_203638 X. tropicalis
XM_012970245 X. tropicalis
XM_012970246 X. tropicalis
XM_012970247 X. tropicalis
XM_018097064 X. tropicalis
IMAGE:8320111 BC142592 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001099900 X. laevis.L
XM_018233900 X. laevis.L
XM_018233901 X. laevis.L
XM_018233902 X. laevis.L

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7528769 CX425571 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA064m13 CR449455 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7564567 CX474927 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7788552 CX333799 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7558020 CX496908 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas104p08 AL958730 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas097l04 AL971057 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8927804 EL675851 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7733836 DN018254 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
st55e10 DC180288 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5384629 BQ397282 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
st84f20 DC187563 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTpA069a23 BX722312 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7579812 CX419036 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5384629 BQ397281 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas097l04 BX755273 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst55e10 DC150002 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst84f20 DC157430 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7788552 CX333798 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7733836 DN018253 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7579812 CX419035 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564567 CX474926 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558020 CX496907 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8927804 EL675850 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TGas104p08 BX754839 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL416n06ex BP674463 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0083E08 AW639488 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0110H12 AW641832 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402186 BG037715 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0005A06 AW633213 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL493a19ex BP707966 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl254p17 DC110266 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7976229 DR715868 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:8320111 DY544724 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGp998L059549 BX851638 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7976229 DR715930 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
rxl254p17 DC075615 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL416n06ex BP712095 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5