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Summary Expression Phenotypes Gene Literature (3) GO Terms (4) Nucleotides (215) Proteins (43) Interactants (118) Wiki
XB-GENEPAGE-941151

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for vps35 - Xenopus laevis

RefSeq mRNAs(4)
Models - Gene (8)
Models - mRNA (8)
mRNAs (6)
ESTs (13)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001093004 NM_001093004.1 VPS35 retromer complex component L homeolog 1650 bp NP_001086473 X. laevis.L
XM_041589326 XM_041589326.1 XP_041445260.1 VPS35 retromer complex component L homeolog isoform X2 3034 bp XP_041445260 X. laevis.L
XM_018256765 XM_018256765.2 VPS35 retromer complex component L homeolog isoform X1 3168 bp XP_018112254 X. laevis.L
NM_001096512 NM_001096512.1 VPS35 retromer complex component S homeolog 3336 bp NP_001089981 X. laevis.S

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g21487 X. laevis.S
NCBI 10.1 XBXL10_1g18883 X. laevis.L
JGI 9.1 Xelaev18025036m.g X. laevis.S
JGI 9.1 Xelaev18022777m.g X. laevis.L
Xenbase 9.2 gene13947 X. laevis.S
Xenbase 9.2 gene8984 X. laevis.L
JGI 7.2 Xelaev16032005m.g X. laevis.S
JGI 6.0 XeXenL6RMv10023839m.g X. laevis.S

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA34803 X. laevis.L
NCBI 10.1 XBmRNA39784 X. laevis.S
JGI 9.1 Xelaev18022777m X. laevis.L
JGI 9.1 Xelaev18025036m X. laevis.S
Xenbase 9.2 rna26159 X. laevis.L
Xenbase 9.2 rna40602 X. laevis.S
JGI 7.2 Xelaev16032005m X. laevis.S
JGI 6.0 XeXenL6RMv10023839m X. laevis.S

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:6865364 BC089195 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:7010103 BC075144 X. laevis.L
NM_001093004 X. laevis.L
NM_001096512 X. laevis.S
XM_018256765 X. laevis.L
XM_041589326 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8643877 EB727402 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8531579 EB466936 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL093c10 BJ071128 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL047l16 BJ040804 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL038g09 BJ039750 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6865364 CA988274 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156795 CA790427 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633791 BU908371 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
PBX0113E05 AW642060 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnga003a08 AW200410 5' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
XL514f15ex BP737876 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL047l16 BJ055176 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XENOPUS_SOURCE_ID:xlnga003a08 AW199351 3' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5