Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (15) Nucleotides (280) Proteins (56) Interactants (224) Wiki
XB-GENEPAGE-943185

Show:     All X. tropicalis X. laevis

Nucleotide sequences for idh3a - All

RefSeq mRNAs(5)
Models - Gene (25)
Models - mRNA (36)
mRNAs (7)
ESTs (140)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_204021 NM_204021.1 isocitrate dehydrogenase 1992 bp NP_989352 X. tropicalis
NM_001092521 NM_001092521.1 isocitrate dehydrogenase (NAD(+)) 3 alpha S homeolog 1762 bp NP_001085990 X. laevis.S
XM_018254263 XM_018254263.2 isocitrate dehydrogenase (NAD(+)) 3 alpha S homeolog isoform X1 1801 bp XP_018109752 X. laevis.S
XM_018252871 XM_018252871.2 isocitrate dehydrogenase 1953 bp XP_018108360 X. laevis.L
XM_018252872 XM_018252872.2 isocitrate dehydrogenase 1994 bp XP_018108361 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g15943 X. laevis.S
NCBI 10.1 XBXL10_1g12975 X. laevis.L
NCBI 10.0 XBXT10g013927 X. tropicalis
ENSEMBL 10.0 cbln2 X. tropicalis
Xenbase 9.2 gene10709 X. laevis.S
Xenbase 9.2 gene14805 X. laevis.L
JGI 9.1 Xelaev18020813m.g X. laevis.S
JGI 9.1 Xelaev18017996m.g X. laevis.L
Xenbase 9.1 gene1453 X. tropicalis
ENSEMBL 9.1 idh3a X. tropicalis
JGI 8.0 Xetrov14013075m.g X. tropicalis
JGI 7.2 Xelaev16034149m.g X. laevis.S
JGI 7.1 Xetro.G00963 X. tropicalis
JGI 6.0 XeXenL6RMv10041003m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000009754 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000050 X. tropicalis
JGI 4.1 gw1.103.220.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_103000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000017 X. tropicalis
JGI 4.1 gw1.103.156.1 X. tropicalis
JGI 4.1 e_gw1.103.220.1 X. tropicalis
JGI 4.1 e_gw1.103.217.1 X. tropicalis
JGI 4.1 e_gw1.103.156.1 X. tropicalis
JGI 4.1 gw1.103.217.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000051 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA24559 X. laevis.L
NCBI 10.1 XBmRNA29794 X. laevis.S
ENSEMBL 10.0 ENSXETT00000072623 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077273 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096224 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021498 X. tropicalis
NCBI 10.0 mRNA068902 X. tropicalis
Xenbase 9.2 rna31122 X. laevis.S
Xenbase 9.2 rna43194 X. laevis.L
ENSEMBL 9.1 ENSXETT00000082946 X. tropicalis
JGI 9.1 Xelaev18020813m X. laevis.S
JGI 9.1 Xelaev18017996m X. laevis.L
ENSEMBL 9.1 ENSXETT00000082134 X. tropicalis
Xenbase 9.1 rna4701 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090683 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092427 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096224 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021498 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072623 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076093 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077273 X. tropicalis
JGI 8.0 Xetrov14013075m X. tropicalis
JGI 7.2 Xelaev16034149m X. laevis.S
JGI 7.1 Xetro.G00963.1 X. tropicalis
JGI 6.0 XeXenL6RMv10041003m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_103000050 X. tropicalis
JGI 4.1 e_gw1.103.217.1 X. tropicalis
JGI 4.1 e_gw1.103.220.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021498 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_103000015 X. tropicalis
JGI 4.1 e_gw1.103.156.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000017 X. tropicalis
JGI 4.1 gw1.103.156.1 X. tropicalis
JGI 4.1 gw1.103.217.1 X. tropicalis
JGI 4.1 gw1.103.220.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:5309202 BC064220 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_204021 X. tropicalis
IMAGE:5536408 BC073655 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092521 X. laevis.S
XM_018254263 X. laevis.S
XM_018252871 X. laevis.L
XM_018252872 X. laevis.L

ESTs (140)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA055f15 CR434662 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7673204 CX882722 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7669949 CX876712 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA057e14 CR442402 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074g24 CR444359 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7667524 CX854288 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA040o05 CR446768 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA028c06 BX743082 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA061h21 BX729496 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA024e23 BX709824 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7665596 CX850925 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA020b15 BX712052 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas011b18 AL629036 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA078i07 BX722084 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas054b05 AL680089 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA054i06 BX724016 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas054d07 AL680102 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA051d17 BX726108 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas108b19 AL956622 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106f09 AL958916 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6980137 CF149969 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8918176 EL832152 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916538 EL829609 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7578130 CX416390 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8853397 EL814799 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7541805 CX448367 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733393 DN017457 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7551822 CX493858 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7713015 CX970795 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7560152 CX516140 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7663695 CX847386 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7657385 CX829103 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654029 CX822712 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs35B24 CN091837 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7711701 CX968258 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:5309202 BQ392233 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6979640 CF149552 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xtbs22K02 CN083233 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs12M22 CN076799 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs03K09 CN073248 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7605357 CX412227 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4564 CX400632 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631825 CX397220 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597288 CX386049 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636051 CX339883 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594026 CX331010 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592859 CX326410 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13467 CX321825 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588414 CX309857 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu012b22 AL641554 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu067b12 AL804932 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO3982 CX934737 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA011f01 CR410179 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CAAO2346 CX932468 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA037b23 CR418686 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7690702 CX915781 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs35B24 CN091836 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TGas054b05 BX746627 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108b19 BX755468 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106f09 BX756056 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7541805 CX448366 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551822 CX493857 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560152 CX516139 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5309202 BQ392232 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu067b12 BX690908 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA011f01 CR410180 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA037b23 CR418687 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055f15 CR434663 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA043o12 CR434961 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074g24 CR444360 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA024e23 BX709825 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA041d17 BX716769 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078i07 BX722085 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA054i06 BX724017 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA051d17 BX726109 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA028c06 BX743083 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7588414 CX309856 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13467 CX321824 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592859 CX326409 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594026 CX331009 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636051 CX339882 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631825 CX397219 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4564 CX400631 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605357 CX412226 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597288 DR891655 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs03K09 CN073247 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs12M22 CN076798 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22K02 CN083232 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7654029 CX822711 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657385 CX829102 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7665596 CX850924 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7669949 CX876711 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7673204 CX882721 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7690702 CX915780 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO2346 CX932467 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7711701 CX968257 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713015 CX970794 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7733393 DN017456 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8853397 EL814800 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918176 EL832153 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:3377262 BE189705 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL076a20 BJ063350 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl240k22 DC105929 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL027d18 BJ041671 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL026e24 BJ034105 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6324220 CA972456 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL022h08 BJ033659 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL001b10 BJ029958 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8737840 EE322581 5' X. laevis.S NICHD_XGC_panc pancreas frog
IMAGE:8534444 EB466826 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:8544649 EB462840 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:6933508 CB945260 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
xl304o08 DC124515 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl222j11 DC100391 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk138c13ex DC047880 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL085l05 BJ066294 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3301245 BE132178 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL489g01ex BP700011 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3300710 BE026350 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL177f08 BJ616556 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
BG409638 BG409638 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:5536408 CF288803 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5514033 CF286867 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL094i03 BJ071475 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998A188302 BX851715 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8320779 DY562373 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
PBX0122D10 AW642864 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6636662 BU910786 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
PBX0035H06 AW635611 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3401753 BE679412 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3377262 BE188740 3' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL022h08 BJ048919 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl304o08 DC089607 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL085l05 BJ083617 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL027d18 BJ050966 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk138c13ex DC014647 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL001b10 BJ044670 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL489g01ex BP732854 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL026e24 BJ049492 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15