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XB-GENEPAGE-950804
Nucleotide sequences for sh3rf1 - All
RefSeq mRNAs(10) |
Models - Gene (26) |
Models - mRNA (35) |
mRNAs (16) |
ESTs (50) |
RefSeq mRNAs (10)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001015973 | NM_001015973.2 | E3 ubiquitin-protein ligase SH3RF1 | 3258 bp | NP_001015973 | X. tropicalis |
XM_012961878 | XM_012961878.3 | E3 ubiquitin-protein ligase SH3RF1 isoform X2 | 3204 bp | XP_012817332 | X. tropicalis |
XM_012961871 | XM_012961871.3 | E3 ubiquitin-protein ligase SH3RF1 isoform X2 | 3234 bp | XP_012817325 | X. tropicalis |
XM_012961866 | XM_012961866.3 | E3 ubiquitin-protein ligase SH3RF1 isoform X1 | 3315 bp | XP_012817320 | X. tropicalis |
NM_001091345 | NM_001091345.1 | E3 ubiquitin-protein ligase SH3RF1 | 3115 bp | NP_001084814 | X. laevis.S |
XM_018230921 | XM_018230921.2 | E3 ubiquitin-protein ligase SH3RF1 isoform X2 | 3204 bp | XP_018086410 | X. laevis.L |
XM_018230913 | XM_018230913.2 | E3 ubiquitin-protein ligase SH3RF1 isoform X1 | 3393 bp | XP_018086402 | X. laevis.L |
XM_018230906 | XM_018230906.2 | E3 ubiquitin-protein ligase SH3RF1 isoform X1 | 3316 bp | XP_018086395 | X. laevis.L |
XM_018235930 | XM_018235930.2 | E3 ubiquitin-protein ligase SH3RF1 isoform X1 | 3189 bp | XP_018091419 | X. laevis.S |
XM_041574820 | XM_041574820.1 | XP_041430754.1 E3 ubiquitin-protein ligase SH3RF1 isoform X1 | 4058 bp | XP_041430754 | X. laevis.S |
Models - Gene (26)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g002884 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g3884 | X. laevis.S |
NCBI | 10.1 | XBXL10_1g925 | X. laevis.L |
ENSEMBL | 10.0 | sh3rf1 | X. tropicalis |
JGI | 9.1 | Xelaev18009169m.g | X. laevis.S |
JGI | 9.1 | Xelaev18005420m.g | X. laevis.L |
Xenbase | 9.1 | gene4984 | X. tropicalis |
Xenbase | 9.2 | gene10729 | X. laevis.S |
Xenbase | 9.2 | gene3039 | X. laevis.L |
ENSEMBL | 9.1 | sh3rf1 | X. tropicalis |
JGI | 8.0 | Xetrov14004816m.g | X. tropicalis |
JGI | 7.1 | Xetro.A02926 | X. tropicalis |
JGI | 7.2 | Xelaev16013686m.g | X. laevis.S |
JGI | 6.0 | XeXenL6RMv10019259m.g | X. laevis.S |
ENSEMBL | 4.1 | ENSXETG00000004943 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_54000062 | X. tropicalis |
JGI | 4.1 | e_gw1.54.114.1 | X. tropicalis |
JGI | 4.1 | e_gw1.54.137.1 | X. tropicalis |
JGI | 4.1 | e_gw1.54.59.1 | X. tropicalis |
JGI | 4.1 | gw1.54.114.1 | X. tropicalis |
JGI | 4.1 | gw1.54.137.1 | X. tropicalis |
JGI | 4.1 | gw1.54.59.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_54000006 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_54000016 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_54000063 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_54000016 | X. tropicalis |
mRNAs based on gene models(35)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA014633 | X. tropicalis |
NCBI | 10.1 | XBmRNA1403 | X. laevis.L |
NCBI | 10.1 | XBmRNA7105 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000010794 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000110119 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000010793 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000074251 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000010795 | X. tropicalis |
JGI | 9.1 | Xelaev18005420m | X. laevis.L |
JGI | 9.1 | Xelaev18009169m | X. laevis.S |
Xenbase | 9.1 | rna16242 | X. tropicalis |
Xenbase | 9.2 | rna8801 | X. laevis.L |
Xenbase | 9.2 | rna31181 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000010794 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000010795 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000074251 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000010793 | X. tropicalis |
JGI | 8.0 | Xetrov14004816m | X. tropicalis |
JGI | 7.1 | Xetro.A02926.1 | X. tropicalis |
JGI | 7.1 | Xetro.A02926.2 | X. tropicalis |
JGI | 7.2 | Xelaev16013686m | X. laevis.S |
JGI | 6.0 | XeXenL6RMv10019259m | X. laevis.S |
JGI | 4.1 | fgenesh1_pg.C_scaffold_54000062 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000010793 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000010795 | X. tropicalis |
JGI | 4.1 | e_gw1.54.114.1 | X. tropicalis |
JGI | 4.1 | e_gw1.54.137.1 | X. tropicalis |
JGI | 4.1 | e_gw1.54.59.1 | X. tropicalis |
JGI | 4.1 | gw1.54.114.1 | X. tropicalis |
JGI | 4.1 | gw1.54.137.1 | X. tropicalis |
JGI | 4.1 | gw1.54.59.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_54000006 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_54000016 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_54000063 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_54000016 | X. tropicalis |
mRNAs from cDNA libraries (16)
Clone | Accession | Species | Library | Anatomy | Stage |
NM_001015973 | X. tropicalis | ||||
TNeu006c09 | CR848380 | X. tropicalis | XGC-neurula | whole organism | NF stage 13 to NF stage 21 |
IMAGE:7567249 | BC167346 | X. tropicalis | NIH_XGC_tropGas7 | whole organism | NF stage 10.5 to NF stage 12.5 |
IMAGE:7715695 | BC169143 | X. tropicalis | NIH_XGC_tropInt1 | intestine | frog |
IMAGE:9040271 | BC171011 | X. tropicalis | |||
XM_012961878 | X. tropicalis | ||||
XM_012961871 | X. tropicalis | ||||
XM_012961866 | X. tropicalis | ||||
IMAGE:6859822 | BC070823 | X. laevis.S | |||
AY762093 | X. laevis.S | ||||
NM_001091345 | X. laevis.S | ||||
XM_018230921 | X. laevis.L | ||||
XM_018230913 | X. laevis.L | ||||
XM_018230906 | X. laevis.L | ||||
XM_018235930 | X. laevis.S | ||||
XM_041574820 | X. laevis.S |