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Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (144) Proteins (33) Interactants (130) Wiki
XB-GENEPAGE-955619

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pfdn1 - All

Models - Gene (24)
Models - mRNA (24)
mRNAs (5)
ESTs (75)

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g005405 X. tropicalis
NCBI 10.1 XBXL10_1g16547 X. laevis.S
NCBI 10.1 XBXL10_1g12192 X. laevis.L
ENSEMBL 10.0 pfdn1 X. tropicalis
JGI 9.1 Xelaev18021521m.g X. laevis.S
JGI 9.1 Xelaev18017119m.g X. laevis.L
Xenbase 9.1 gene1428 X. tropicalis
Xenbase 9.2 gene13931 X. laevis.S
Xenbase 9.2 gene5532 X. laevis.L
ENSEMBL 9.1 pfdn1 X. tropicalis
JGI 7.1 Xetro.C01255 X. tropicalis
JGI 7.2 Xelaev16057550m.g X. laevis.S
JGI 6.0 XeXenL6RMv10001497m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018313 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_313000027 X. tropicalis
JGI 4.1 e_gw1.313.15.1 X. tropicalis
JGI 4.1 e_gw1.313.53.1 X. tropicalis
JGI 4.1 e_gw1.313.65.1 X. tropicalis
JGI 4.1 gw1.313.15.1 X. tropicalis
JGI 4.1 gw1.313.53.1 X. tropicalis
JGI 4.1 gw1.313.65.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_313000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_313000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_313000008 X. tropicalis

Models - mRNA (24)

Source Version Model Species
NCBI 10.0 mRNA026860 X. tropicalis
NCBI 10.1 XBmRNA22815 X. laevis.L
NCBI 10.1 XBmRNA31068 X. laevis.S
ENSEMBL 10.0 ENSXETT00000039666 X. tropicalis
JGI 9.1 Xelaev18017119m X. laevis.L
JGI 9.1 Xelaev18021521m X. laevis.S
Xenbase 9.1 rna4618 X. tropicalis
Xenbase 9.2 rna16203 X. laevis.L
Xenbase 9.2 rna40562 X. laevis.S
ENSEMBL 9.1 ENSXETT00000039666 X. tropicalis
JGI 7.1 Xetro.C01255.1 X. tropicalis
JGI 7.2 Xelaev16057550m X. laevis.S
JGI 6.0 XeXenL6RMv10001497m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_313000027 X. tropicalis
ENSEMBL 4.1 ENSXETT00000039666 X. tropicalis
JGI 4.1 e_gw1.313.15.1 X. tropicalis
JGI 4.1 e_gw1.313.53.1 X. tropicalis
JGI 4.1 e_gw1.313.65.1 X. tropicalis
JGI 4.1 gw1.313.15.1 X. tropicalis
JGI 4.1 gw1.313.53.1 X. tropicalis
JGI 4.1 gw1.313.65.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_313000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_313000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_313000008 X. tropicalis

mRNAs (5)

Clone Accession Species Library Anatomy Stage
TGas059p07 CT025427 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001114011 X. tropicalis
XM_002937726 X. tropicalis
XM_018252114 X. laevis.L
XM_018256208 X. laevis.S

ESTs (75)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8871753 EL714293 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867156 EL706273 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867369 EL705731 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs33C18 CN090363 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19D18 CN081613 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15C15 CN078491 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs04F06 CN074233 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7627740 CX381843 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617317 CX361947 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7533723 CX427257 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563597 CX473517 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA060e07 CR427251 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr01B21 CN119452 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20J18 CN103201 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr19O19 CN101398 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10L22 CN096071 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas042p24 AL650825 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA037m08 BX715674 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA040a12 BX715541 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu112c23 AL798672 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas084j08 AL783957 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059p07 AL679403 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu010k07 AL638016 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7026982 CF784939 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7027396 CF784250 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8867156 EL706272 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867369 EL705730 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs33C18 CN090362 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19D18 CN081612 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15C15 CN078490 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs04F06 CN074232 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7617317 CX361946 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7563597 CX473516 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7627740 DR900422 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA079n17 CR438487 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr03N14 CN113744 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20J18 CN103200 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr19O19 CN101397 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10L22 CN096070 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu112c23 BX691420 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7026982 CF784938 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7027396 CF784249 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xl267p17 DC114133 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl265p17 DC113550 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl317l19 DC128316 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl317k19 DC128297 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl318j19 DC128555 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk116h08ex DC040859 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL435g02ex BP680626 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445d02ex BP684179 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL491c15ex BP700874 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477h18ex BP695436 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998M1312242 BX844932 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998O118087 BX844357 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:5542836 BQ736778 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5162427 BQ398269 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:4957343 BI313404 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202783 BG552725 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4083437 BG019321 5' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3381166 BF048259 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
PBX0113A08 AW642019 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl265p17 DC078705 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl318j19 DC099798 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl317k19 DC099554 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk116h08ex DC007946 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL435g02ex BP717224 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497e18ex BP741152 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477h18ex BP729378 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445d02ex BP720145 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162427 BQ398268 3' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:4957343 BI315037 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202783 BG579447 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4083437 BG022642 3' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3301858 BF071991 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3381166 BF049004 3' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9