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Summary Expression Phenotypes Gene Literature (0) GO Terms (49) Nucleotides (242) Proteins (53) Interactants (45) Wiki
XB-GENEPAGE-969095

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ddx1 - All

RefSeq mRNAs(2)
Models - Gene (30)
Models - mRNA (36)
mRNAs (5)
ESTs (115)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001011133 NM_001011133.2 ATP-dependent RNA helicase DDX1 3455 bp NP_001011133 X. tropicalis
NM_001097883 NM_001097883.1 ATP-dependent RNA helicase DDX1 3036 bp NP_001091352 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g24416 X. laevis.L
NCBI 10.0 XBXT10g016872 X. tropicalis
ENSEMBL 10.0 ddx1 X. tropicalis
Xenbase 9.2 gene4826 X. laevis.L
JGI 9.1 Xelaev18028071m.g X. laevis.L
Xenbase 9.1 gene18336 X. tropicalis
ENSEMBL 9.1 ddx1 X. tropicalis
JGI 8.0 Xetrov14021141m.g X. tropicalis
JGI 7.2 Xelaev16079034m.g X. laevis.L
JGI 7.1 Xetro.E00346 X. tropicalis
JGI 6.0 XeXenL6RMv10024832m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017825 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5400001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_540000001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_540000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_540000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_540000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_540000001 X. tropicalis
JGI 4.1 e_gw1.540.1.1 X. tropicalis
JGI 4.1 e_gw1.540.2.1 X. tropicalis
JGI 4.1 e_gw1.540.49.1 X. tropicalis
JGI 4.1 gw1.540.1.1 X. tropicalis
JGI 4.1 gw1.540.2.1 X. tropicalis
JGI 4.1 gw1.540.49.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400049 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5400001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5400001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5400002 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA45701 X. laevis.L
ENSEMBL 10.0 ENSXETT00000038646 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068741 X. tropicalis
NCBI 10.0 mRNA083590 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067271 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109353 X. tropicalis
Xenbase 9.2 rna14094 X. laevis.L
ENSEMBL 9.1 ENSXETT00000038646 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067271 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068741 X. tropicalis
Xenbase 9.1 rna39024 X. tropicalis
JGI 9.1 Xelaev18028071m X. laevis.L
JGI 8.0 Xetrov14021141m X. tropicalis
JGI 7.2 Xelaev16079034m X. laevis.L
JGI 7.1 Xetro.E00346.2 X. tropicalis
JGI 7.1 Xetro.E00346.1 X. tropicalis
JGI 6.0 XeXenL6RMv10024832m X. laevis.L
JGI 4.1 gw1.540.2.1 X. tropicalis
JGI 4.1 gw1.540.49.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_540000001 X. tropicalis
JGI 4.1 e_gw1.540.2.1 X. tropicalis
JGI 4.1 e_gw1.540.49.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038646 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5400001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5400001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5400002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5400001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5400049 X. tropicalis
JGI 4.1 e_gw1.540.1.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_540000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_540000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_540000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_540000001 X. tropicalis
JGI 4.1 gw1.540.1.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:6981079 BC084181 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TEgg029l11 CR855610 X. tropicalis
NM_001011133 X. tropicalis
IMAGE:8530603 BC129617 X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
NM_001097883 X. laevis.L

ESTs (115)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7693885 CX921237 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6990572 CF217505 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990572 CF217506 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7030084 CF782419 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas014f14 AL630909 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032k12 AL648714 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057i22 AL683022 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087p15 AL955085 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7578934 CX417953 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579640 CX418527 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573342 CX436931 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574150 CX440730 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568195 CX456010 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu113o02 AL787695 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu087m16 AL805169 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384648 BQ397458 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6981079 CF148012 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA011g11 CR409035 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA059m14 CR432250 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA051i10 CR438808 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA008b19 CR562648 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014n07 CR565291 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA020e06 CR571781 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA034k20 BX715871 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA050j04 BX727690 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA047e20 BX737335 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT11805 CX312224 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592072 CX325945 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT398 CX359023 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606181 CX366357 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623827 CX373396 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633501 CX375012 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7638194 CX383586 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625166 CX402929 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625531 CX403431 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs23O23 CN083819 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7016967 CF525135 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7652134 CX815018 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658675 CX837256 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7664599 CX849343 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7688745 CX911950 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689461 CX912642 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690569 CX914815 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692853 CX918943 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN12152 CX928613 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO3645 CX934133 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7715186 CX974747 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7757652 DR875743 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7757624 DR875894 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7849884 DT387874 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7847736 DT532711 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8937840 EL640871 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8859312 EL823587 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8912989 EL824521 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883409 EL838660 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887886 EL846294 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9018105 EL866456 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas057i22 BX747315 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7606181 CX366356 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688745 CX911949 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8883409 EL838661 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA008b19 CR562649 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7689461 CX912641 3' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA014n07 CR565292 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7847736 DT532710 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTpA005o16 BX709379 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7690569 CX914814 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA034k20 BX715872 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7692853 CX918942 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA047e20 BX737336 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8937840 EL640870 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7592072 CX325944 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7693885 CX921236 3' X. tropicalis NIH_XGC_tropTe4 testis frog
XZT398 CX359022 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4462668 BG885669 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:5307718 BQ389419 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
CAAN12152 CX928612 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7623827 CX373395 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633501 CX375011 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO3645 CX934132 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:9018105 EL866457 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7625166 CX402928 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas087p15 BX751782 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7578934 CX417952 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7715186 CX974746 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7579640 CX418526 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8859312 EL823588 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7573342 CX436930 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7638194 DR903548 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7574150 CX440729 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568195 CX456009 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs23O23 CN083818 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7757652 DR875742 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TNeu087m16 BX696388 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384648 BQ397457 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7651925 CX814549 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7757624 DR875893 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA011g11 CR409036 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7849884 DT387873 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA059m14 CR432251 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8530603 EB480971 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
xl256p15 DC110864 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl256p17 DC110866 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL106m15 BJ068463 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0101D09 AW641016 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl298c03 DC122492 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL005m10 BJ030999 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6326007 CA973691 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL081h03 BJ064981 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6863923 CA987314 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxl256p15 DC076192 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL106m15 BJ085702 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL005m10 BJ045946 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL081h03 BJ082538 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25