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Summary Expression Phenotypes Gene Literature (0) GO Terms (20) Nucleotides (456) Proteins (64) Interactants (153) Wiki
XB-GENEPAGE-983585

Show:     All X. tropicalis X. laevis

Nucleotide sequences for matr3 - All

RefSeq mRNAs(13)
Models - Gene (24)
Models - mRNA (31)
mRNAs (19)
ESTs (285)

RefSeq mRNAs (13)

Accession Version Protein Name Length Protein Species
NM_001006791 NM_001006791.1 matrin-3 3174 bp NP_001006792 X. tropicalis
XM_018092034 XM_018092034.2 matrin-3 isoform X1 3180 bp XP_017947523 X. tropicalis
XM_031897836 XM_031897836.1 XP_031753696.1 matrin-3 isoform X2 2199 bp XP_031753696 X. tropicalis
NM_001092313 NM_001092313.2 matrin-3 3129 bp NP_001085782 X. laevis.S
XM_018254254 XM_018254254.2 matrin-3 isoform X1 3170 bp XP_018109743 X. laevis.S
XM_018254255 XM_018254255.2 matrin-3 isoform X2 2168 bp XP_018109744 X. laevis.S
XM_041587623 XM_041587623.1 XP_041443557.1 matrin-3 isoform X2 2166 bp XP_041443557 X. laevis.S
XM_018242132 XM_018242132.2 matrin-3 isoform X1 3515 bp XP_018097621 X. laevis.L
XM_018242133 XM_018242133.2 matrin-3 isoform X2 3512 bp XP_018097622 X. laevis.L
XM_018242134 XM_018242134.2 matrin-3 isoform X3 2952 bp XP_018097623 X. laevis.L
XM_018242135 XM_018242135.2 matrin-3 isoform X4 2994 bp XP_018097624 X. laevis.L
XM_018242136 XM_018242136.2 matrin-3 isoform X5 2487 bp XP_018097625 X. laevis.L
XM_041586140 XM_041586140.1 XP_041442074.1 matrin-3 isoform X5 2490 bp XP_041442074 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g16560 X. laevis.S
NCBI 10.1 XBXL10_1g12168 X. laevis.L
NCBI 10.0 XBXT10g013630 X. tropicalis
ENSEMBL 10.0 matr3 X. tropicalis
Xenbase 9.2 gene2768 X. laevis.L
Xenbase 9.2 gene8090 X. laevis.S
JGI 9.1 Xelaev18004594m.g X. laevis.L
JGI 9.1 Xelaev18021535m.g X. laevis.S
Xenbase 9.1 gene5668 X. tropicalis
ENSEMBL 9.1 matr3 X. tropicalis
JGI 8.0 Xetrov14015535m.g X. tropicalis
JGI 7.2 Xelaev16057524m.g X. laevis.S
JGI 7.1 Xetro.C01232 X. tropicalis
JGI 6.0 XeXenL6RMv10026179m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000003838 X. tropicalis
JGI 4.1 e_gw1.65.61.1 X. tropicalis
JGI 4.1 e_gw1.65.155.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000020 X. tropicalis
JGI 4.1 e_gw1.65.131.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000019 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_65000007 X. tropicalis
JGI 4.1 gw1.65.61.1 X. tropicalis
JGI 4.1 gw1.65.155.1 X. tropicalis
JGI 4.1 gw1.65.131.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA31099 X. laevis.S
NCBI 10.1 XBmRNA22770 X. laevis.L
NCBI 10.0 mRNA067446 X. tropicalis
ENSEMBL 10.0 ENSXETT00000008341 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066310 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071005 X. tropicalis
Xenbase 9.2 rna23586 X. laevis.S
Xenbase 9.2 rna8057 X. laevis.L
ENSEMBL 9.1 ENSXETT00000089920 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066310 X. tropicalis
ENSEMBL 9.1 ENSXETT00000008341 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071005 X. tropicalis
JGI 9.1 Xelaev18021535m X. laevis.S
JGI 9.1 Xelaev18004594m X. laevis.L
Xenbase 9.1 rna18388 X. tropicalis
JGI 8.0 Xetrov14015535m X. tropicalis
JGI 7.2 Xelaev16057524m X. laevis.S
JGI 7.1 Xetro.C01232.2 X. tropicalis
JGI 7.1 Xetro.C01232.3 X. tropicalis
JGI 7.1 Xetro.C01232.1 X. tropicalis
JGI 6.0 XeXenL6RMv10026179m X. laevis.S
JGI 4.1 gw1.65.155.1 X. tropicalis
JGI 4.1 e_gw1.65.155.1 X. tropicalis
JGI 4.1 e_gw1.65.61.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008341 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_65000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000020 X. tropicalis
JGI 4.1 gw1.65.131.1 X. tropicalis
JGI 4.1 e_gw1.65.131.1 X. tropicalis
JGI 4.1 gw1.65.61.1 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
IMAGE:6977687 BC076655 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas107n11 CR761638 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001006791 X. tropicalis
XM_018092034 X. tropicalis
XM_031897836 X. tropicalis
IMAGE:5512420 BC073339 X. laevis.S
BJ065806 X. laevis.S
BP680889 X. laevis.S
BP695490 X. laevis.S
NM_001092313 X. laevis.S
XM_018254254 X. laevis.S
XM_018254255 X. laevis.S
XM_041587623 X. laevis.S
XM_018242132 X. laevis.L
XM_018242133 X. laevis.L
XM_018242134 X. laevis.L
XM_018242135 X. laevis.L
XM_018242136 X. laevis.L
XM_041586140 X. laevis.L

ESTs (285)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas120l20 AL967223 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143l23 AL968885 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100f20 AL971252 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5381580 BQ527013 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7852349 DT392253 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7762284 DR884368 5' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7743675 DN036469 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7743364 DN036292 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
CAAO8402 CX955887 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO2442 CX932636 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7690107 CX913874 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7666129 CX851970 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7643762 CX799221 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640893 CX794178 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7611614 CX404023 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595600 CX335705 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595386 CX335308 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA052l23 CR589833 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019p14 CR570291 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014i23 CR565118 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA050e03 CR449988 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA042e02 CR439126 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA016h13 CR430859 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062p02 CR427189 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu128c16 AL799298 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108p18 AL795775 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096m07 AL791409 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083k18 AL785335 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075k18 AL782350 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076c12 AL782132 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091k11 AL778055 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu039n10 AL660904 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040i02 AL660786 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu039l05 AL660165 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030l21 AL656402 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030d06 AL655560 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030k19 AL650794 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017m21 AL643168 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012a16 AL641375 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu003i21 AL639854 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013c16 AL636859 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6995343 CF239065 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6988304 CF220433 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6991020 CF216854 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6991020 CF216853 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307650 BQ389376 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7567805 CX508732 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546768 CX500549 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546915 CX500258 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546244 CX499261 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519032 CX479103 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541236 CX462928 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568810 CX457279 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568454 CX456473 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539315 CX451670 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538307 CX447712 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524676 CX439442 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575578 CX430812 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578019 CX424074 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530890 CX420322 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530190 CX419549 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st76b16 DC185507 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st75h21 DC185343 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6977687 CF224232 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:4440792 BG513020 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas022n19 AL627867 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas009p04 AL628481 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas012i21 AL629258 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013m24 AL632256 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037f03 AL647630 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044o11 AL655089 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063i16 AL678446 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064i16 AL678537 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas070f11 AL680654 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n04 AL773916 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076h23 AL774115 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102f03 AL956192 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas105o05 AL960130 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087i14 AL960354 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120l23 AL960659 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116e09 AL960822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas099f04 AL961171 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107n11 AL962827 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144o01 AL963547 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas133h11 AL963589 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112i07 AL963820 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098i03 AL964842 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092h23 AL966048 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6977687 CF224231 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5381580 BQ527012 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:4440792 BG486237 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas070f11 BX749771 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076h23 BX750072 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071n04 BX751232 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087i14 BX751672 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102f03 BX753747 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107n11 BX755395 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116e09 BX755800 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas105o05 BX755947 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12