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Summary Expression Phenotypes Gene Literature (0) GO Terms (19) Nucleotides (152) Proteins (59) Interactants (24) Wiki
XB-GENEPAGE-990307

Show:     All X. tropicalis X. laevis

Nucleotide sequences for dhx38 - All

RefSeq mRNAs(7)
Models - Gene (29)
Models - mRNA (37)
mRNAs (8)
ESTs (47)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_002937580 XM_002937580.5 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 4718 bp XP_002937626 X. tropicalis
XM_012962327 XM_012962327.3 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 4754 bp XP_012817781 X. tropicalis
XM_018257919 XM_018257919.2 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1 4086 bp XP_018113408 X. laevis.L
XM_018257920 XM_018257920.2 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1 4079 bp XP_018113409 X. laevis.L
XM_018257921 XM_018257921.2 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2 4041 bp XP_018113410 X. laevis.L
XM_041590181 XM_041590181.1 XP_041446115.1 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1 4073 bp XP_041446115 X. laevis.L
XM_018260540 XM_018260540.2 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 4071 bp XP_018116029 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g18736 X. laevis.L
NCBI 10.1 XBXL10_1g21287 X. laevis.S
NCBI 10.0 XBXT10g004608 X. tropicalis
ENSEMBL 10.0 dhx38 X. tropicalis
Xenbase 9.2 gene43196 X. laevis.S
Xenbase 9.2 gene17348 X. laevis.L
JGI 9.1 Xelaev18024901m.g X. laevis.S
JGI 9.1 Xelaev18022608m.g X. laevis.L
Xenbase 9.1 gene29204 X. tropicalis
ENSEMBL 9.1 dhx38 X. tropicalis
JGI 7.1 Xetro.D00869 X. tropicalis
JGI 6.0 XeXenL6RMv10038124m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000023447 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3030009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_303000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_303000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_303000009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3030029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3030028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030090 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3030014 X. tropicalis
JGI 4.1 gw1.303.90.1 X. tropicalis
JGI 4.1 gw1.303.12.1 X. tropicalis
JGI 4.1 gw1.303.11.1 X. tropicalis
JGI 4.1 e_gw1.303.90.1 X. tropicalis
JGI 4.1 e_gw1.303.12.1 X. tropicalis
JGI 4.1 e_gw1.303.11.1 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA39385 X. laevis.S
NCBI 10.1 XBmRNA34537 X. laevis.L
ENSEMBL 10.0 ENSXETT00000050636 X. tropicalis
NCBI 10.0 mRNA022917 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070071 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077428 X. tropicalis
Xenbase 9.2 rna50639 X. laevis.L
Xenbase 9.2 rna86480 X. laevis.S
Xenbase 9.1 rna56275 X. tropicalis
JGI 9.1 Xelaev18024901m X. laevis.S
JGI 9.1 Xelaev18022608m X. laevis.L
ENSEMBL 9.1 ENSXETT00000103506 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094258 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081978 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080127 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077428 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070071 X. tropicalis
ENSEMBL 9.1 ENSXETT00000050636 X. tropicalis
JGI 7.1 Xetro.D00869.1 X. tropicalis
JGI 6.0 XeXenL6RMv10038124m X. laevis.L
JGI 4.1 e_gw1.303.11.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050636 X. tropicalis
JGI 4.1 gw1.303.90.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_303000009 X. tropicalis
JGI 4.1 gw1.303.11.1 X. tropicalis
JGI 4.1 gw1.303.12.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_303000029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_303000028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030090 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3030011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3030014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3030009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3030029 X. tropicalis
JGI 4.1 e_gw1.303.90.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3030028 X. tropicalis
JGI 4.1 e_gw1.303.12.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
TGas001m02 CR848116 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_002937580 X. tropicalis
XM_012962327 X. tropicalis
XM_018257919 X. laevis.L
XM_018257920 X. laevis.L
XM_018257921 X. laevis.L
XM_041590181 X. laevis.L
XM_018260540 X. laevis.S

ESTs (47)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7799919 DN061411 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TNeu062b11 AL673470 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas001m02 AL594793 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7667206 CX853775 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA050p20 CR423364 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7616633 CX393301 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3421 CX398786 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663263 CX845988 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAO5256 CX937036 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7668395 CX856006 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7714717 CX973767 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TNeu040a16 AL660747 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6976477 CF223129 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976477 CF223128 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7714717 CX973766 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7663263 CX845987 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTbA050p20 CR423365 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7799919 DN061410 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7616633 CX393300 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7668395 CX856005 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667206 CX853774 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XL013l03 BJ029842 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5156787 CA790419 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5161649 CA791465 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL187f08 BJ618939 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl231k02 DC103173 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl246f09 DC107664 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL416b04ex BP674205 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL419l17ex BP675443 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL442b06ex BP683138 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL473m06ex BP694181 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL511m21ex BP704416 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk109a14ex DC038537 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk80c07ex DC061324 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8539982 EB479516 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:5515692 CF286096 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6877392 CB206192 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL104h22 BJ057582 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk80c07ex DC027822 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk109a14ex DC005601 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL511m21ex BP737231 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL442b06ex BP719330 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl246f09 DC073201 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl231k02 DC069053 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL187f08 BJ635565 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL104h22 BJ076050 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL013l03 BJ044555 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15