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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (109) Proteins (48) Interactants (16) Wiki
XB-GENEPAGE-990791

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pdzd4 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (33)
mRNAs (6)
ESTs (38)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001142064 NM_001142064.1 PDZ domain-containing protein 4 6168 bp NP_001135536 X. tropicalis
XM_012968107 XM_012968107.3 PDZ domain-containing protein 4 isoform X1 6081 bp XP_012823561 X. tropicalis
XM_018232834 XM_018232834.2 PDZ domain-containing protein 4 isoform X1 4212 bp XP_018088323 X. laevis.S
XM_041575351 XM_041575351.1 XP_041431285.1 PDZ domain-containing protein 4 isoform X2 2768 bp XP_041431285 X. laevis.S
XM_041575352 XM_041575352.1 XP_041431286.1 PDZ domain-containing protein 4 isoform X3 2756 bp XP_041431286 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g37771 X. laevis.S
NCBI 10.0 XBXT10g015665 X. tropicalis
ENSEMBL 10.0 pdzd4 X. tropicalis
Xenbase 9.2 gene39599 X. laevis.S
JGI 9.1 Xelaev18041785m.g X. laevis.S
Xenbase 9.1 gene1457 X. tropicalis
ENSEMBL 9.1 pdzd4 X. tropicalis
JGI 7.1 Xetro.H00311 X. tropicalis
JGI 6.0 XeXenL6RMv10054348m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000725 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220066 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3220005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_322000005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3220014 X. tropicalis
JGI 4.1 gw1.322.66.1 X. tropicalis
JGI 4.1 gw1.322.50.1 X. tropicalis
JGI 4.1 gw1.322.1.1 X. tropicalis
JGI 4.1 e_gw1.322.50.1 X. tropicalis
JGI 4.1 e_gw1.322.1.1 X. tropicalis
JGI 4.1 e_gw1.322.66.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA71394 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075614 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122946 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081875 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001614 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092462 X. tropicalis
NCBI 10.0 mRNA077545 X. tropicalis
Xenbase 9.2 rna81236 X. laevis.S
ENSEMBL 9.1 ENSXETT00000081875 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092462 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001614 X. tropicalis
Xenbase 9.1 rna4709 X. tropicalis
JGI 9.1 Xelaev18041785m X. laevis.S
ENSEMBL 9.1 ENSXETT00000075614 X. tropicalis
JGI 7.1 Xetro.H00311.2 X. tropicalis
JGI 7.1 Xetro.H00311.3 X. tropicalis
JGI 7.1 Xetro.H00311.1 X. tropicalis
JGI 6.0 XeXenL6RMv10054348m X. laevis.S
JGI 4.1 estExt_Genewise1.C_3220001 X. tropicalis
JGI 4.1 e_gw1.322.50.1 X. tropicalis
JGI 4.1 e_gw1.322.66.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001614 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3220005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3220014 X. tropicalis
JGI 4.1 e_gw1.322.1.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220066 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_322000005 X. tropicalis
JGI 4.1 gw1.322.1.1 X. tropicalis
JGI 4.1 gw1.322.50.1 X. tropicalis
JGI 4.1 gw1.322.66.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7649604 BC168005 X. tropicalis NIH_XGC_tropBrn2 brain frog
NM_001142064 X. tropicalis
XM_012968107 X. tropicalis
XM_018232834 X. laevis.S
XM_041575351 X. laevis.S
XM_041575352 X. laevis.S

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7653303 CX821221 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7645736 CX803381 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647291 CX805577 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647561 CX805803 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648603 CX807760 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648481 CX807913 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649337 CX809213 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649502 CX809360 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649442 CX809606 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649604 CX810062 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650414 CX811382 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650806 CX812084 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650924 CX812238 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651612 CX813347 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7792904 CX814221 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649519 CX815707 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7786490 CX328443 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788648 CX334361 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618048 CX362697 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs20B04 CN082203 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7641184 CX795215 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642278 CX797217 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7788648 CX334360 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7650414 CX811381 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7618048 CX362696 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7648481 CX807912 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs20B04 CN082202 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7649519 CX815706 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641184 CX795214 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650806 CX812083 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7792904 CX814220 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645736 CX803380 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649442 CX809605 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647291 CX805576 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653303 CX821220 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7647561 CX805802 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651612 CX813346 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648603 CX807759 3' X. tropicalis NIH_XGC_tropBrn2 brain frog