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Summary Expression Phenotypes Gene Literature (24) GO Terms (187) Nucleotides (1086) Proteins (56) Interactants (563) Wiki
XB-GENEPAGE-1001205

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hmgb1 - All

RefSeq mRNAs(10)
Models - Gene (35)
Models - mRNA (35)
mRNAs (14)
ESTs (839)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_203895 NM_203895.1 high mobility group protein B1 1203 bp NP_989226 X. tropicalis
XM_012956664 XM_012956664.3 high mobility group protein B1 isoform X1 1354 bp XP_012812118 X. tropicalis
NM_001087367 NM_001087367.1 high mobility group box 1 L homeolog 1213 bp NP_001080836 X. laevis.L
XM_018244835 XM_018244835.2 high mobility group box 1 L homeolog isoform X1 1166 bp XP_018100324 X. laevis.L
NM_001088325 NP_001081794.2 high mobility group protein-1 1190 bp NP_001081794 X. laevis.S
NM_001088325 NP_001081794.2 high mobility group protein-1 1190 bp NP_001081794 X. laevis.S
NM_001088325 NM_001088325.2 NP_001081794.2 high mobility group protein-1 1190 bp NP_001081794 X. laevis.S
NM_001088325 NM_001088325.2 NP_001081794.2 high mobility group protein-1 1190 bp NP_001081794 X. laevis.S
XM_018250260 XM_018250260.2 high mobility group protein B1 1249 bp XP_018105749 X. laevis.S
XM_018250261 XM_018250261.2 high mobility group protein B1 1250 bp XP_018105750 X. laevis.S

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g8391 X. laevis.L
NCBI 10.0 XBXT10g003346 X. tropicalis
NCBI 10.1 XBXL10_1g10967 X. laevis.S
ENSEMBL 10.0 hmgb1 X. tropicalis
Xenbase 9.2 gene11098 X. laevis.L
Xenbase 9.1 gene4193 X. tropicalis
ENSEMBL 9.1 hmgb1 X. tropicalis
JGI 8.0 Xetrov14010630m.g X. tropicalis
JGI 7.2 Xelaev16058026m.g X. laevis.L
JGI 7.1 Xetro.B01805 X. tropicalis
JGI 6.0 XeXenL6RMv10006811m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036345m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019166 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_800006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_800038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_800011 X. tropicalis
JGI 4.1 e_gw1.80.43.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_80000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000037 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000038 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_800037 X. tropicalis
JGI 4.1 e_gw1.80.149.1 X. tropicalis
JGI 4.1 e_gw1.80.150.1 X. tropicalis
JGI 4.1 e_gw1.80.191.1 X. tropicalis
JGI 4.1 gw1.80.149.1 X. tropicalis
JGI 4.1 gw1.80.150.1 X. tropicalis
JGI 4.1 gw1.80.191.1 X. tropicalis
JGI 4.1 gw1.80.43.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800150 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800191 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA20631 X. laevis.S
NCBI 10.1 XBmRNA15894 X. laevis.L
ENSEMBL 10.0 ENSXETT00000041556 X. tropicalis
NCBI 10.0 mRNA016977 X. tropicalis
Xenbase 9.2 rna32256 X. laevis.L
ENSEMBL 9.1 ENSXETT00000041556 X. tropicalis
Xenbase 9.1 rna13700 X. tropicalis
JGI 8.0 Xetrov14010630m X. tropicalis
JGI 7.2 Xelaev16058026m X. laevis.L
JGI 7.1 Xetro.B01805.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006811m X. laevis.L
JGI 6.0 XeXenL6RMv10036345m X. laevis.L
JGI 4.1 estExt_Genewise1.C_800191 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_80000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000037 X. tropicalis
JGI 4.1 e_gw1.80.149.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_80000009 X. tropicalis
JGI 4.1 gw1.80.149.1 X. tropicalis
JGI 4.1 gw1.80.150.1 X. tropicalis
JGI 4.1 gw1.80.191.1 X. tropicalis
JGI 4.1 gw1.80.43.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000038 X. tropicalis
JGI 4.1 e_gw1.80.150.1 X. tropicalis
JGI 4.1 e_gw1.80.191.1 X. tropicalis
JGI 4.1 e_gw1.80.43.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041556 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_800006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_800037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_800038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_800011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_800150 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:5380425 BC063332 X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TTpA012a14 CR760900 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TEgg067f14 CR926239 X. tropicalis
NM_203895 X. tropicalis
XM_012956664 X. tropicalis
IMAGE:6872106 BC054148 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001087367 X. laevis.L
XM_018244835 X. laevis.L
IMAGE:5516344 BC073449 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001088325 X. laevis.S
NM_001088325 X. laevis.S
U21933 X. laevis.S
XM_018250260 X. laevis.S
XM_018250261 X. laevis.S

ESTs (839)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA069g07 CR436333 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs14P19 CN078290 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA078i04 CR437314 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas024a11 AL628893 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA068i01 CR438519 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA079c20 CR439385 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs14H04 CN078359 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA065n19 CR445010 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas011l10 AL629088 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA023h11 CR445081 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA057b22 CR445218 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs15M12 CN078738 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA032i12 CR445969 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002f03 CR447336 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5307735 BQ389255 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TTbA006i01 CR447908 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA050i04 CR449253 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs15D20 CN078969 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA046b10 CR449781 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5308607 BQ390740 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA002m01 CR560636 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs16I22 CN079348 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA002i24 CR560974 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:5308372 BQ390790 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA001n24 CR564689 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014e16 CR565369 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs17N12 CN080398 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA017d12 CR568516 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas024d16 AL629828 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7570931 CX511548 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs18F08 CN080984 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7571152 CX512096 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5380425 BQ525082 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7513689 CX743257 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513848 CX743671 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7517220 CX748731 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
xtbs25F17 CN085385 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7518028 CX749743 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TGas001i09 AL594592 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7641767 CX795613 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs27I03 CN086391 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7647885 CX806398 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas087k07 AL955664 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7648973 CX808339 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs27J06 CN086910 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7663967 CX847937 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas100m01 AL956153 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7666707 CX852656 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs28A06 CN087167 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7668240 CX855603 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas106n21 AL958963 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7668945 CX874751 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs28N02 CN087639 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7670265 CX876923 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671898 CX880625 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas095c05 AL962378 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7673983 CX883472 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7793577 CX885653 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs32O02 CN089924 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7793702 CX885858 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas133i23 AL963389 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8233 CX942464 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas144g11 AL963520 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO9462 CX957848 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs34G06 CN090967 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7716483 CX977167 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720493 CX983985 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:6985671 CF152806 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
xtbs35C08 CN091553 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:6988173 CF220545 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6986375 CF221928 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xtbs35J05 CN091751 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:6993614 CF238144 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xtbs07I24 CN092924 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:6995387 CF238997 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xtbs09G04 CN094175 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:6995460 CF239436 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xtbs09B08 CN094425 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7028504 CF781310 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xtbs09D08 CN094446 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr15G23 CN098727 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7027768 CF781973 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr15A20 CN098830 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7027739 CF781997 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr20I24 CN102862 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7027595 CF782088 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr32H18 CN108922 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7093648 CK655425 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr33K06 CN109246 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7093451 CK662577 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr34E17 CN109622 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
st10f03 DC165691 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13m22 DC166725 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st18i10 DC168131 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20d04 DC168868 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20g12 DC168928 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34f07 DC173133 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st43f24 DC177483 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st44b02 DC177663 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5