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Summary Expression Phenotypes Gene Literature (6) GO Terms (6) Nucleotides (113) Proteins (70) Interactants (156) Wiki
XB-GENEPAGE-1007176

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for mmp16 - All

RefSeq mRNAs(8)
Models - Gene (36)
Models - mRNA (48)
mRNAs (11)
ESTs (8)

RefSeq mRNAs (8)

Accession Version name Length Protein Species
NM_001015992 NM_001015992. matrix metalloproteinase-16 precursor 2427 bp NP_001015992 X. tropicalis
XM_012964668 XM_012964668. matrix metalloproteinase-16 isoform X1 7760 bp XP_012820122 X. tropicalis
XM_041565421 XM_041565421. XP_041421355.1 matrix metallopeptidase 16 L homeolog isoform X1 2633 bp XP_041421355 X. laevis.L
XM_041565422 XM_041565422. XP_041421356.1 matrix metallopeptidase 16 L homeolog isoform X2 2728 bp XP_041421356 X. laevis.L
XM_041565423 XM_041565423. XP_041421357.1 matrix metallopeptidase 16 L homeolog isoform X3 2616 bp XP_041421357 X. laevis.L
XM_018223848 XM_018223848. PREDICTED: matrix metalloproteinase-16-like isoform X1 3797 bp XP_018079337 X. laevis.S
XM_018223849 XM_018223849. PREDICTED: matrix metalloproteinase-16-like isoform X2 3781 bp XP_018079338 X. laevis.S
NM_001091793 NM_001091793. matrix metallopeptidase 16 L homeolog precursor 2409 bp NP_001085262 X. laevis.L

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g007103 X. tropicalis
NCBI 10.1 XBXL10_1g28130 X. laevis.L
NCBI 10.1 XBXL10_1g29667 X. laevis.S
ENSEMBL 10.0 mmp16 X. tropicalis
JGI 9.1 Xelaev18032164m.g X. laevis.L
JGI 9.1 Xelaev18033856m.g X. laevis.S
Xenbase 9.1 gene20402 X. tropicalis
Xenbase 9.2 gene47401 X. laevis.L
Xenbase 9.2 gene13557 X. laevis.S
ENSEMBL 9.1 mmp16 X. tropicalis
JGI 7.1 Xetro.F00319 X. tropicalis
JGI 7.2 Xelaev16028891m.g X. laevis.L
JGI 6.0 XeXenL6RMv10002531m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013710 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4520009 X. tropicalis
JGI 4.1 e_gw1.452.33.1 X. tropicalis
JGI 4.1 e_gw1.452.50.1 X. tropicalis
JGI 4.1 e_gw1.452.51.1 X. tropicalis
JGI 4.1 e_gw1.452.53.1 X. tropicalis
JGI 4.1 e_gw1.452.58.1 X. tropicalis
JGI 4.1 e_gw1.452.59.1 X. tropicalis
JGI 4.1 gw1.452.33.1 X. tropicalis
JGI 4.1 gw1.452.50.1 X. tropicalis
JGI 4.1 gw1.452.51.1 X. tropicalis
JGI 4.1 gw1.452.53.1 X. tropicalis
JGI 4.1 gw1.452.58.1 X. tropicalis
JGI 4.1 gw1.452.59.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4520004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520053 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4520001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_452000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_452000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_452000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_452000001 X. tropicalis

mRNAs based on gene models(48)

Source Version Model Species
NCBI 10.0 mRNA035142 X. tropicalis
NCBI 10.1 XBmRNA52824 X. laevis.L
NCBI 10.1 XBmRNA55845 X. laevis.S
ENSEMBL 10.0 ENSXETT00000067531 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094626 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029987 X. tropicalis
JGI 9.1 Xelaev18032164m X. laevis.L
JGI 9.1 Xelaev18033856m X. laevis.S
Xenbase 9.1 rna42182 X. tropicalis
Xenbase 9.2 rna92544 X. laevis.L
Xenbase 9.2 rna39458 X. laevis.S
ENSEMBL 9.1 ENSXETT00000100431 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068603 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080058 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079571 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076472 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029993 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094626 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029987 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080314 X. tropicalis
JGI 7.1 Xetro.F00319.1 X. tropicalis
JGI 7.2 Xelaev16028891m X. laevis.L
JGI 6.0 XeXenL6RMv10002531m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_4520009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029987 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029993 X. tropicalis
JGI 4.1 e_gw1.452.33.1 X. tropicalis
JGI 4.1 e_gw1.452.50.1 X. tropicalis
JGI 4.1 e_gw1.452.51.1 X. tropicalis
JGI 4.1 e_gw1.452.53.1 X. tropicalis
JGI 4.1 e_gw1.452.58.1 X. tropicalis
JGI 4.1 e_gw1.452.59.1 X. tropicalis
JGI 4.1 gw1.452.33.1 X. tropicalis
JGI 4.1 gw1.452.50.1 X. tropicalis
JGI 4.1 gw1.452.51.1 X. tropicalis
JGI 4.1 gw1.452.53.1 X. tropicalis
JGI 4.1 gw1.452.58.1 X. tropicalis
JGI 4.1 gw1.452.59.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4520004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4520053 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4520001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_452000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_452000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_452000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_452000001 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
NM_001015992 X. tropicalis
TNeu050l03 CR848310 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012964668 X. tropicalis
AY310397 X. laevis.L
NM_001091793 X. laevis.L
IMAGE:9041378 BC169744 X. laevis.L
XM_018223849 X. laevis.S
XM_018223848 X. laevis.S
XM_041565423 X. laevis.L
XM_041565422 X. laevis.L
XM_041565421 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu050l03 AL662331 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7641990 CX796521 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643550 CX799071 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653975 CX822665 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7600438 CX363777 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600438 CX363776 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7653975 CX822664 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:5570028 BQ735036 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32