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Summary Expression Phenotypes Gene Literature (1) GO Terms (28) Nucleotides (204) Proteins (44) Interactants (48) Wiki
XB-GENEPAGE-1012107

Show:     All X. tropicalis X. laevis

Nucleotide sequences for aco1 - All

RefSeq mRNAs(3)
Models - Gene (23)
Models - mRNA (33)
mRNAs (5)
ESTs (103)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001142171 NM_001142171.1 cytoplasmic aconitate hydratase 3576 bp NP_001135643 X. tropicalis
XM_012957530 XM_012957530.3 cytoplasmic aconitate hydratase isoform X1 4558 bp XP_012812984 X. tropicalis
NM_001087108 NM_001087108.1 aconitase 1 L homeolog 2816 bp NP_001080577 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g1961 X. laevis.L
NCBI 10.0 XBXT10g009143 X. tropicalis
ENSEMBL 10.0 aco1 X. tropicalis
Xenbase 9.2 gene13109 X. laevis.L
JGI 9.1 Xelaev18006711m.g X. laevis.L
Xenbase 9.1 gene24626 X. tropicalis
ENSEMBL 9.1 aco1 X. tropicalis
JGI 8.0 Xetrov14002943m.g X. tropicalis
JGI 7.2 Xelaev16078004m.g X. laevis.L
JGI 7.1 Xetro.A01861 X. tropicalis
JGI 6.0 XeXenL6RMv10012250m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009184 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_162000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_162000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_162000040 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_162000007 X. tropicalis
JGI 4.1 e_gw1.162.78.1 X. tropicalis
JGI 4.1 e_gw1.162.69.1 X. tropicalis
JGI 4.1 e_gw1.162.6.1 X. tropicalis
JGI 4.1 gw1.162.78.1 X. tropicalis
JGI 4.1 gw1.162.69.1 X. tropicalis
JGI 4.1 gw1.162.6.1 X. tropicalis
JGI 4.1 C_scaffold_162000007 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA3478 X. laevis.L
ENSEMBL 10.0 ENSXETT00000020189 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070896 X. tropicalis
NCBI 10.0 mRNA045270 X. tropicalis
Xenbase 9.2 rna38105 X. laevis.L
Xenbase 9.1 rna48998 X. tropicalis
JGI 9.1 Xelaev18006711m X. laevis.L
ENSEMBL 9.1 ENSXETT00000104502 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096820 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094230 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082143 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076679 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076484 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070896 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067293 X. tropicalis
ENSEMBL 9.1 ENSXETT00000020189 X. tropicalis
JGI 8.0 Xetrov14002943m X. tropicalis
JGI 7.2 Xelaev16078004m X. laevis.L
JGI 7.1 Xetro.A01861.2 X. tropicalis
JGI 7.1 Xetro.A01861.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012250m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_162000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_162000040 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_162000007 X. tropicalis
JGI 4.1 e_gw1.162.78.1 X. tropicalis
JGI 4.1 e_gw1.162.69.1 X. tropicalis
JGI 4.1 e_gw1.162.6.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020189 X. tropicalis
JGI 4.1 C_scaffold_162000007 X. tropicalis
JGI 4.1 gw1.162.78.1 X. tropicalis
JGI 4.1 gw1.162.69.1 X. tropicalis
JGI 4.1 gw1.162.6.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_162000008 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7717731 BC168529 X. tropicalis NIH_XGC_tropInt1 intestine frog
NM_001142171 X. tropicalis
XM_012957530 X. tropicalis
IMAGE:5570813 BC043991 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087108 X. laevis.L

ESTs (103)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu032c01 AL655733 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas082k15 AL784206 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107b17 AL962776 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110k02 AL965826 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas118n21 AL970347 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7575403 CX442395 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550108 CX486167 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545335 CX487533 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550646 CX509731 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu015b01 AL635828 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105d10 AL786411 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu100f09 AL803151 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7517600 CX749249 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTbA011m03 CR409081 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA070f21 CR429231 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA026e10 CR573775 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA041g03 CR585741 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA077d18 BX738037 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA042p19 BX741652 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA030b11 BX741890 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA032e07 BX744273 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7587186 CX313394 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618473 CX363462 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615837 CX392483 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612947 CX405429 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606071 CX413128 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637034 DR903087 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7686494 CX908067 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687762 CX909992 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688476 CX911380 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689370 CX913031 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690241 CX914163 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690648 CX915732 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691515 CX916847 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693223 CX919904 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694746 CX923011 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696309 CX925387 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN12242 CX928786 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7709481 CX964709 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713785 CX972239 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7714582 CX974176 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717731 CX979249 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7739048 DN028485 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7747826 DN043793 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7748146 DN044354 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7748630 DN045678 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753053 DN053655 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8924534 EL669888 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8919866 EL834029 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859829 EL843286 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7028211 CF780988 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7030491 CF782649 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas041h11 AL653364 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas062m14 AL683343 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7694746 CX923010 3' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA041g03 CR585742 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7714582 CX974175 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTpA077d18 BX738038 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7691515 CX916846 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA042p19 BX741653 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7748630 DN045677 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TTpA030b11 BX741891 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7693223 CX919903 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8919866 EL834030 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7618473 CX363461 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7753053 DN053654 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7612947 CX405428 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7696309 CX925386 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7637034 CX407028 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606071 CX413127 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7747826 DN043792 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7615837 DR896717 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12242 CX928785 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas082k15 BX750911 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107b17 BX753780 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7575403 CX442394 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550108 CX486166 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7686494 CX908066 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8859829 EL843287 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7550646 CX509730 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7687762 CX909991 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7709481 CX964708 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8910840 EL810530 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7688476 CX911379 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7748146 DN044353 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7517600 CX749248 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7689370 CX913030 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7713785 CX972238 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7690241 CX914162 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA070f21 CR429232 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8924534 EL669887 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
THdA026e10 CR573776 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7690648 CX915731 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5440251 CF287923 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0123H08 AW642994 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0159F02 AW646074 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8640139 EB732617 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:4930711 BQ731532 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5570813 BQ735333 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32