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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (155) Proteins (62) Interactants (4) Wiki
XB-GENEPAGE-1016716

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atg4d - All

Models - Gene (30)
Models - mRNA (32)
mRNAs (15)
ESTs (44)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g009672 X. tropicalis
NCBI 10.1 XBXL10_1g14162 X. laevis.L
NCBI 10.1 XBXL10_1g17102 X. laevis.S
ENSEMBL 10.0 atg4d X. tropicalis
JGI 9.1 Xelaev18019019m.g X. laevis.L
JGI 9.1 Xelaev18021643m.g X. laevis.S
Xenbase 9.1 gene22654 X. tropicalis
Xenbase 9.2 gene18125 X. laevis.L
Xenbase 9.2 gene6003 X. laevis.S
ENSEMBL 9.1 atg4d X. tropicalis
JGI 8.0 Xetrov14012013m.g X. tropicalis
JGI 7.1 Xetro.K00259 X. tropicalis
JGI 7.2 Xelaev16023214m.g X. laevis.L
JGI 6.0 XeXenL6RMv10002350m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011644 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_520000004 X. tropicalis
JGI 4.1 e_gw1.520.118.1 X. tropicalis
JGI 4.1 e_gw1.520.171.1 X. tropicalis
JGI 4.1 e_gw1.520.186.1 X. tropicalis
JGI 4.1 gw1.520.118.1 X. tropicalis
JGI 4.1 gw1.520.171.1 X. tropicalis
JGI 4.1 gw1.520.186.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5200018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200118 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200186 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5200025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5200010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_520000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_520000010 X. tropicalis

Models - mRNA (32)

Source Version Model Species
NCBI 10.0 mRNA047741 X. tropicalis
NCBI 10.1 XBmRNA26700 X. laevis.L
NCBI 10.1 XBmRNA31707 X. laevis.S
ENSEMBL 10.0 ENSXETT00000025461 X. tropicalis
JGI 9.1 Xelaev18019019m X. laevis.L
JGI 9.1 Xelaev18021643m X. laevis.S
Xenbase 9.1 rna45755 X. tropicalis
Xenbase 9.2 rna52969 X. laevis.L
Xenbase 9.2 rna17559 X. laevis.S
ENSEMBL 9.1 ENSXETT00000025461 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098144 X. tropicalis
JGI 8.0 Xetrov14012013m X. tropicalis
JGI 7.1 Xetro.K00259.2 X. tropicalis
JGI 7.1 Xetro.K00259.1 X. tropicalis
JGI 7.2 Xelaev16023214m X. laevis.L
JGI 6.0 XeXenL6RMv10002350m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_520000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025461 X. tropicalis
JGI 4.1 e_gw1.520.118.1 X. tropicalis
JGI 4.1 e_gw1.520.171.1 X. tropicalis
JGI 4.1 e_gw1.520.186.1 X. tropicalis
JGI 4.1 gw1.520.118.1 X. tropicalis
JGI 4.1 gw1.520.171.1 X. tropicalis
JGI 4.1 gw1.520.186.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5200018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200118 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5200186 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5200025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5200010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_520000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_520000010 X. tropicalis

mRNAs (15)

Clone Accession Species Library Anatomy Stage
NM_001045781 X. tropicalis
TEgg041o01 CR942779 X. tropicalis
IMAGE:7687965 BC122931 X. tropicalis NIH_XGC_tropTe4 testis frog
XM_031898013 X. tropicalis
IMAGE:6950186 BC079754 X. laevis.L
NM_001093948 X. laevis.L
IMAGE:8322345 BC157740 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001114829 X. laevis.S
XM_018253980 X. laevis.S
XM_018253979 X. laevis.S
XM_018253978 X. laevis.S
XM_018253977 X. laevis.S
XM_041587449 X. laevis.S
XM_041587448 X. laevis.S
XM_041587227 X. laevis.L

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8905807 EL797966 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8915442 EL828565 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919581 EL833069 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8892420 EL853106 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7559751 CX515031 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st13k24 DC166686 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st46d02 DC178144 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8955643 EL655406 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7666288 CX852404 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667842 CX854840 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7687520 CX909270 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687965 CX910432 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688658 CX911669 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689253 CX912517 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu001i15 AL634526 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038h22 AL661370 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA067h02 BX721476 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA067h02 BX721477 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8905807 EL797967 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8915442 EL828566 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8892420 EL853107 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7688658 CX911668 3' X. tropicalis NIH_XGC_tropTe4 testis frog
rst13k24 DC136612 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst48d02 DC148328 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst46d02 DC147854 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst47d02 DC148096 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst38a07 DC145841 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7559751 CX515030 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7784555 CX741034 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7687965 CX910431 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7666288 CX852403 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
TNeu084d23 BX698992 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XL056c23 BJ070309 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063d19 BJ059632 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054i07 BJ069769 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL478i05ex BP695784 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0142H03 AW644679 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
AW764342 AW764342 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
XL063d19 BJ078150 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL056c23 BJ087339 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL110i15 BJ090923 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL478i05ex BP729639 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl287k10 DC084890 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
AW764707 AW764707 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24