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Summary Expression Phenotypes Gene Literature (7) GO Terms (6) Nucleotides (71) Proteins (40) Interactants (154) Wiki
XB-GENEPAGE-479907

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nkx3-3 - All

RefSeq mRNAs(3)
Models - Gene (27)
Models - mRNA (29)
mRNAs (4)
ESTs (5)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002937181 XM_002937181.5 homeobox protein zampogna 3772 bp XP_002937227 X. tropicalis
NM_001085685 NM_001085685.1 homeobox protein zampogna 742 bp NP_001079154 X. laevis.S
XM_018225289 XM_018225289.2 homeobox protein zampogna-like 1394 bp XP_018080778 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g30464 X. laevis.L
NCBI 10.1 XBXL10_1g32778 X. laevis.S
NCBI 10.0 XBXT10g019101 X. tropicalis
ENSEMBL 10.0 nkx3-3 X. tropicalis
Xenbase 9.2 gene13652 X. laevis.L
Xenbase 9.2 gene11917 X. laevis.S
JGI 9.1 Xelaev18034721m.g X. laevis.L
JGI 9.1 Xelaev18037053m.g X. laevis.S
Xenbase 9.1 gene19149 X. tropicalis
ENSEMBL 9.1 nkx3-3 X. tropicalis
JGI 7.1 Xetro.G00588 X. tropicalis
JGI 6.0 XeXenL6RMv10011636m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018432 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_271000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_271000041 X. tropicalis
JGI 4.1 e_gw1.271.115.1 X. tropicalis
JGI 4.1 e_gw1.271.155.1 X. tropicalis
JGI 4.1 e_gw1.271.156.1 X. tropicalis
JGI 4.1 gw1.271.115.1 X. tropicalis
JGI 4.1 gw1.271.155.1 X. tropicalis
JGI 4.1 gw1.271.156.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2710031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710155 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710156 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2710016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2710040 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA57392 X. laevis.L
NCBI 10.1 XBmRNA61855 X. laevis.S
ENSEMBL 10.0 ENSXETT00000039928 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080534 X. tropicalis
NCBI 10.0 mRNA094409 X. tropicalis
Xenbase 9.2 rna39735 X. laevis.L
Xenbase 9.2 rna34606 X. laevis.S
JGI 9.1 Xelaev18034721m X. laevis.L
ENSEMBL 9.1 ENSXETT00000039928 X. tropicalis
Xenbase 9.1 rna40177 X. tropicalis
JGI 9.1 Xelaev18037053m X. laevis.S
ENSEMBL 9.1 ENSXETT00000080534 X. tropicalis
JGI 7.1 Xetro.G00588.1 X. tropicalis
JGI 6.0 XeXenL6RMv10011636m X. laevis.S
JGI 4.1 gw1.271.156.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_271000041 X. tropicalis
JGI 4.1 e_gw1.271.155.1 X. tropicalis
JGI 4.1 e_gw1.271.156.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000039928 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2710040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2710016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2710031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710155 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2710156 X. tropicalis
JGI 4.1 e_gw1.271.115.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_271000017 X. tropicalis
JGI 4.1 gw1.271.115.1 X. tropicalis
JGI 4.1 gw1.271.155.1 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002937181 X. tropicalis
XM_018225289 X. laevis.L
AF095721 X. laevis.S
NM_001085685 X. laevis.S

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA051j16 BX724164 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7707792 CX960741 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA051j16 BX724165 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7707792 CX960740 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:6881020 CB208233 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage