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Summary Expression Phenotypes Gene Literature (26) GO Terms (59) Nucleotides (264) Proteins (78) Interactants (170) Wiki
XB-GENEPAGE-480874

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sin3a - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (26)
Models - mRNA (38)
mRNAs (4)
ESTs (64)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002937477 XM_002937477.5 paired amphipathic helix protein Sin3a isoform X1 5498 bp XP_002937523 X. tropicalis
XM_012966900 XM_012966900.3 paired amphipathic helix protein Sin3a isoform X1 5537 bp XP_012822354 X. tropicalis
XM_012966901 XM_012966901.3 paired amphipathic helix protein Sin3a isoform X1 5326 bp XP_012822355 X. tropicalis
XM_018092398 XM_018092398.2 paired amphipathic helix protein Sin3a isoform X2 3955 bp XP_017947887 X. tropicalis

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g018687 X. tropicalis
ENSEMBL 10.0 sin3a X. tropicalis
Xenbase 9.1 gene24465 X. tropicalis
ENSEMBL 9.1 sin3a X. tropicalis
JGI 8.0 Xetrov14013786m.g X. tropicalis
JGI 7.1 Xetro.G01017 X. tropicalis
ENSEMBL 4.1 ENSXETG00000015283 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2950011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950071 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2950006 X. tropicalis
JGI 4.1 C_scaffold_295000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2950023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2950008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_295000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_295000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2950022 X. tropicalis
JGI 4.1 e_gw1.295.2.1 X. tropicalis
JGI 4.1 e_gw1.295.52.1 X. tropicalis
JGI 4.1 e_gw1.295.71.1 X. tropicalis
JGI 4.1 gw1.295.2.1 X. tropicalis
JGI 4.1 gw1.295.52.1 X. tropicalis
JGI 4.1 gw1.295.71.1 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000033424 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089600 X. tropicalis
NCBI 10.0 mRNA092303 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076119 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083169 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089600 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090113 X. tropicalis
ENSEMBL 9.1 ENSXETT00000033424 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069043 X. tropicalis
Xenbase 9.1 rna48703 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071224 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076119 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077500 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080871 X. tropicalis
JGI 8.0 Xetrov14013786m X. tropicalis
JGI 7.1 Xetro.G01017.1 X. tropicalis
JGI 7.1 Xetro.G01017.2 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_295000008 X. tropicalis
JGI 4.1 gw1.295.2.1 X. tropicalis
JGI 4.1 gw1.295.52.1 X. tropicalis
JGI 4.1 gw1.295.71.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2950022 X. tropicalis
JGI 4.1 e_gw1.295.2.1 X. tropicalis
JGI 4.1 e_gw1.295.52.1 X. tropicalis
JGI 4.1 e_gw1.295.71.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033424 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033425 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2950006 X. tropicalis
JGI 4.1 C_scaffold_295000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2950023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2950008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2950011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2950071 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_295000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000023 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002937477 X. tropicalis
XM_012966900 X. tropicalis
XM_012966901 X. tropicalis
XM_018092398 X. tropicalis

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:4440618 BG512997 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TTbA002k06 CR408746 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004e19 CR408107 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA052o18 CR587073 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032k13 CR577612 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7603920 CX395876 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7635737 CX339735 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592070 CX325929 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586774 CX312651 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT11140 CX311165 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7560404 CX516232 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548013 CX489623 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534425 CX428749 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7657955 CX829774 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN12177 CX928659 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694704 CX923056 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694012 CX921471 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691620 CX917261 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691629 CX916983 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691011 CX915604 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689274 CX913027 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CABC4482 DR833351 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
st5h24 DC174561 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4h24 DC174280 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8959296 EL664072 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TGas081n20 AL776793 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas026b17 AL655326 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu110b02 AL801472 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136i23 AL796468 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122k05 AL793667 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu047g24 AL659528 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013i06 AL636889 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA064o13 BX729653 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009o10 BX706880 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xtbs19I20 CN081366 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr41N14 CN114942 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA038a04 CR447688 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA017n19 CR432511 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055e01 CR431877 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA072i07 CR428796 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:4440618 BG486214 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas081n20 BX749228 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7691629 CX916982 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CABC4482 DR833350 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7635737 DR902282 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603920 DR893524 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12177 CX928658 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691011 CX915603 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694704 CX923055 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA064o13 BX729654 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7592070 CX325928 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst5h24 DC144240 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7586774 CX312650 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs19I20 CN081365 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7694012 CX921470 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA038a04 CR447689 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7689274 CX913026 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7560404 CX516231 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7691620 CX917260 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7548013 CX489622 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst4h24 DC143957 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA004e19 CR408108 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7534425 CX428748 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA052o18 CR587074 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30