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Summary Expression Phenotypes Gene Literature (18) GO Terms (22) Nucleotides (76) Proteins (42) Interactants (359) Wiki
XB-GENEPAGE-482329

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxc9 - All

RefSeq mRNAs(3)
Models - Gene (28)
Models - mRNA (29)
mRNAs (5)
ESTs (6)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001017256 NM_001017256.2 NP_001017256.1 homeobox C9 896 bp NP_001017256 X. tropicalis
XM_018250139 XM_018250139.2 homeobox protein Hox-C9 3475 bp XP_018105628 X. laevis.S
XM_018247556 XM_018247556.2 homeobox protein Hox-C9 3636 bp XP_018103045 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g8245 X. laevis.L
NCBI 10.1 XBXL10_1g10840 X. laevis.S
NCBI 10.0 XBXT10g010441 X. tropicalis
ENSEMBL 10.0 hoxc9 X. tropicalis
Xenbase 9.2 gene15201 X. laevis.L
Xenbase 9.2 gene34711 X. laevis.S
JGI 9.1 Xelaev18013567m.g X. laevis.L
JGI 9.1 Xelaev18016030m.g X. laevis.S
Xenbase 9.1 gene2590 X. tropicalis
JGI 7.2 Xelaev16009231m.g X. laevis.S
JGI 7.1 Xetro.B01508 X. tropicalis
JGI 6.0 XeXenL6RMv10010313m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000023475 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000010 X. tropicalis
JGI 4.1 e_gw1.226.138.1 X. tropicalis
JGI 4.1 e_gw1.226.35.1 X. tropicalis
JGI 4.1 e_gw1.226.81.1 X. tropicalis
JGI 4.1 gw1.226.138.1 X. tropicalis
JGI 4.1 gw1.226.35.1 X. tropicalis
JGI 4.1 gw1.226.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260138 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260010 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_226000001 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA15586 X. laevis.L
NCBI 10.1 XBmRNA20389 X. laevis.S
NCBI 10.0 mRNA051635 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089389 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110384 X. tropicalis
Xenbase 9.2 rna44372 X. laevis.L
Xenbase 9.2 rna74370 X. laevis.S
JGI 9.1 Xelaev18013567m X. laevis.L
JGI 9.1 Xelaev18016030m X. laevis.S
Xenbase 9.1 rna8614 X. tropicalis
JGI 7.2 Xelaev16009231m X. laevis.S
JGI 7.1 Xetro.B01508.1 X. tropicalis
JGI 6.0 XeXenL6RMv10010313m X. laevis.S
JGI 4.1 gw1.226.138.1 X. tropicalis
JGI 4.1 gw1.226.35.1 X. tropicalis
JGI 4.1 gw1.226.81.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_226000001 X. tropicalis
JGI 4.1 e_gw1.226.35.1 X. tropicalis
JGI 4.1 e_gw1.226.81.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050678 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260138 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000005 X. tropicalis
JGI 4.1 e_gw1.226.138.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7860727 BC122054 X. tropicalis
TNeu021n18 CR760047 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001017256 X. tropicalis
XM_018250139 X. laevis.S
XM_018247556 X. laevis.L

ESTs (6)

Clone Accession 5'/3' Species Library Anatomy Stage
st114a11 DC193006 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu021n18 AL636440 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7608268 CX409148 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst82a24 DC156890 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst114a11 DC164260 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7608268 CX409147 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41