Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (18) GO Terms (29) Nucleotides (107) Proteins (40) Interactants (585) Wiki
XB-GENEPAGE-484526

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nkx6-2 - All

RefSeq mRNAs(3)
Models - Gene (28)
Models - mRNA (28)
mRNAs (5)
ESTs (37)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002937790 XM_002937790.5 homeobox protein Nkx-6.2 1808 bp XP_002937836 X. tropicalis
NM_001096886 NM_001096886.1 NK6 homeobox 2 L homeolog 1654 bp NP_001090355 X. laevis.L
XM_018227362 XM_018227362.2 homeobox protein Nkx-6.2 1257 bp XP_018082851 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g30280 X. laevis.L
NCBI 10.1 XBXL10_1g32562 X. laevis.S
NCBI 10.0 XBXT10g003047 X. tropicalis
ENSEMBL 10.0 nkx6-2 X. tropicalis
Xenbase 9.2 gene50658 X. laevis.L
Xenbase 9.2 gene1480 X. laevis.S
JGI 9.1 Xelaev18036852m.g X. laevis.S
Xenbase 9.1 gene2736 X. tropicalis
ENSEMBL 9.1 nkx6-2 X. tropicalis
JGI 8.0 Xetrov14028824m.g X. tropicalis
JGI 7.1 Xetro.G00389 X. tropicalis
JGI 6.0 XeXenL6RMv10038576m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000023614 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_316000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_316000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_316000005 X. tropicalis
JGI 4.1 e_gw1.316.10.1 X. tropicalis
JGI 4.1 e_gw1.316.115.1 X. tropicalis
JGI 4.1 e_gw1.316.119.1 X. tropicalis
JGI 4.1 gw1.316.10.1 X. tropicalis
JGI 4.1 gw1.316.115.1 X. tropicalis
JGI 4.1 gw1.316.119.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160119 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3160005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3160002 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA61428 X. laevis.S
NCBI 10.1 XBmRNA57006 X. laevis.L
ENSEMBL 10.0 ENSXETT00000050951 X. tropicalis
NCBI 10.0 mRNA015493 X. tropicalis
Xenbase 9.2 rna97276 X. laevis.L
Xenbase 9.2 rna4308 X. laevis.S
Xenbase 9.1 rna9045 X. tropicalis
JGI 9.1 Xelaev18036852m X. laevis.S
ENSEMBL 9.1 ENSXETT00000050951 X. tropicalis
JGI 8.0 Xetrov14028824m X. tropicalis
JGI 7.1 Xetro.G00389.1 X. tropicalis
JGI 6.0 XeXenL6RMv10038576m X. laevis.L
JGI 4.1 e_gw1.316.10.1 X. tropicalis
JGI 4.1 gw1.316.10.1 X. tropicalis
JGI 4.1 gw1.316.115.1 X. tropicalis
JGI 4.1 gw1.316.119.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_316000002 X. tropicalis
JGI 4.1 e_gw1.316.115.1 X. tropicalis
JGI 4.1 e_gw1.316.119.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050951 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3160005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3160002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3160119 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_316000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_316000002 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
TNeu010j02 CT010540 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002937790 X. tropicalis
IMAGE:8317795 BC123229 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001096886 X. laevis.L
XM_018227362 X. laevis.S

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA076o21 BX734257 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA016m17 CR561614 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA002b13 CR560672 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA077i13 CR428161 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu138d09 AL796822 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu025b23 AL642184 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu010j02 AL638236 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st49c04 DC178853 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st50c04 DC179072 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st51c04 DC179298 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st78n23 DC186216 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35p23 DC173579 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7557181 CX505497 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst35p23 DC143335 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst49c04 DC148579 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst50c04 DC148796 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst51c04 DC149004 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst62c11 DC151681 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst78n23 DC156122 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7557181 CX505496 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7515121 DR831590 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTbA077i13 CR428162 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA002b13 CR560673 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA016m17 CR561615 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA076o21 BX734258 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7982863 DR728115 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk147d05ex DC050835 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL440p06ex BP682843 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl226n14 DC101709 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8317795 DY572312 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL461d15ex BP690341 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL509m14ex BP703813 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk144m10ex DC050050 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk147d05ex DC017508 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk144m10ex DC016729 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL509m14ex BP736702 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL440p06ex BP719107 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5