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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (129) Proteins (47) Interactants (40) Wiki
XB-GENEPAGE-485955

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pafah1b3 - All

RefSeq mRNAs(4)
Models - Gene (33)
Models - mRNA (33)
mRNAs (7)
ESTs (26)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001006714 NM_001006714. platelet-activating factor acetylhydrolase IB subunit alpha1 1255 bp NP_001006715 X. tropicalis
XM_018224377 XM_018224377. platelet activating factor acetylhydrolase 1b catalytic subunit 3 L homeolog isoform X1 1384 bp XP_018079866 X. laevis.L
NM_001095224 NM_001095224. platelet activating factor acetylhydrolase 1b catalytic subunit 3 S homeolog 1210 bp NP_001088693 X. laevis.S
NM_001089828 NM_001089828. platelet activating factor acetylhydrolase 1b catalytic subunit 3 L homeolog 1241 bp NP_001083297 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g017234 X. tropicalis
NCBI 10.1 XBXL10_1g33655 X. laevis.S
NCBI 10.1 XBXL10_1g31689 X. laevis.L
ENSEMBL 10.0 pafah1b3 X. tropicalis
JGI 9.1 Xelaev18037739m.g X. laevis.S
JGI 9.1 Xelaev18035974m.g X. laevis.L
Xenbase 9.1 gene6458 X. tropicalis
Xenbase 9.2 gene45999 X. laevis.S
Xenbase 9.2 gene38659 X. laevis.L
ENSEMBL 9.1 pafah1b3 X. tropicalis
JGI 8.0 Xetrov14031030m.g X. tropicalis
JGI 7.1 Xetro.G01790 X. tropicalis
JGI 7.2 Xelaev16030564m.g X. laevis.S
JGI 6.0 XeXenL6RMv10040410m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000012063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2090033 X. tropicalis
JGI 4.1 e_gw1.209.100.1 X. tropicalis
JGI 4.1 e_gw1.209.101.1 X. tropicalis
JGI 4.1 e_gw1.209.99.1 X. tropicalis
JGI 4.1 gw1.209.100.1 X. tropicalis
JGI 4.1 gw1.209.101.1 X. tropicalis
JGI 4.1 gw1.209.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2090025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090100 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090101 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2090003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2090032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2090004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_209000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_209000032 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_209000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_209000004 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA085293 X. tropicalis
NCBI 10.1 XBmRNA59841 X. laevis.L
NCBI 10.1 XBmRNA63574 X. laevis.S
ENSEMBL 10.0 ENSXETT00000026340 X. tropicalis
JGI 9.1 Xelaev18035974m X. laevis.L
JGI 9.1 Xelaev18037739m X. laevis.S
Xenbase 9.1 rna20838 X. tropicalis
Xenbase 9.2 rna79895 X. laevis.L
Xenbase 9.2 rna90590 X. laevis.S
ENSEMBL 9.1 ENSXETT00000026340 X. tropicalis
JGI 8.0 Xetrov14031030m X. tropicalis
JGI 7.1 Xetro.G01790.1 X. tropicalis
JGI 7.2 Xelaev16030564m X. laevis.S
JGI 6.0 XeXenL6RMv10040410m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_2090033 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026340 X. tropicalis
JGI 4.1 e_gw1.209.100.1 X. tropicalis
JGI 4.1 e_gw1.209.101.1 X. tropicalis
JGI 4.1 e_gw1.209.99.1 X. tropicalis
JGI 4.1 gw1.209.100.1 X. tropicalis
JGI 4.1 gw1.209.101.1 X. tropicalis
JGI 4.1 gw1.209.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2090025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090100 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2090101 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2090003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2090032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2090004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_209000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_209000032 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_209000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_209000004 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
NM_001006714 X. tropicalis
IMAGE:7017499 BC075442 X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7203925 BC087329 X. laevis.S
IMAGE:4203836 BC060351 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001089828 X. laevis.L
NM_001095224 X. laevis.S
XM_018224377 X. laevis.L

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr17J05 CN100371 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7668100 CX855625 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7533409 CX434622 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XZT1037 CX359996 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8947302 EG653632 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8966637 EL656017 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8913316 EL825376 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8921815 EL835997 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7017499 CF524272 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TGas080c20 AL774376 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096c20 AL969620 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7533409 CX434621 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8921815 EL835998 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas080c20 BX750681 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096c20 BX754981 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr17J05 CN100370 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
PBX0152A02 AW645441 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3201409 AW766101 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:6878668 CB180475 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL220l05 BJ628160 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8534046 EB463788 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
xlk118b13ex DC041362 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0096B11 AW640533 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL076f18 BJ081659 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL220l05 BJ644423 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk118b13ex DC008469 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5