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Summary Expression Phenotypes Gene Literature (6) GO Terms (28) Nucleotides (94) Proteins (42) Interactants (183) Wiki
XB-GENEPAGE-486282

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nphp1 - All

RefSeq mRNAs(2)
Models - Gene (25)
Models - mRNA (35)
mRNAs (3)
ESTs (14)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
XM_002940340 XM_002940340.4 nephrocystin-1 2674 bp XP_002940386 X. tropicalis
NM_001091731 NM_001091731.1 nephronophthisis 1 (juvenile) L homeolog 2486 bp NP_001085200 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g23008 X. laevis.L
NCBI 10.0 XBXT10g009345 X. tropicalis
ENSEMBL 10.0 nphp1 X. tropicalis
Xenbase 9.2 gene11905 X. laevis.L
JGI 9.1 Xelaev18026633m.g X. laevis.L
Xenbase 9.1 gene33670 X. tropicalis
ENSEMBL 9.1 nphp1 X. tropicalis
JGI 8.0 Xetrov14023162m.g X. tropicalis
JGI 7.2 Xelaev16047754m.g X. laevis.L
JGI 7.1 Xetro.E01459 X. tropicalis
JGI 6.0 XeXenL6RMv10019813m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022446 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_604000014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6040003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6040008 X. tropicalis
JGI 4.1 e_gw1.604.19.1 X. tropicalis
JGI 4.1 e_gw1.604.30.1 X. tropicalis
JGI 4.1 e_gw1.604.35.1 X. tropicalis
JGI 4.1 gw1.604.19.1 X. tropicalis
JGI 4.1 gw1.604.30.1 X. tropicalis
JGI 4.1 gw1.604.35.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6040014 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA42862 X. laevis.L
NCBI 10.0 mRNA046190 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079073 X. tropicalis
Xenbase 9.2 rna34569 X. laevis.L
Xenbase 9.1 rna63420 X. tropicalis
JGI 9.1 Xelaev18026633m X. laevis.L
ENSEMBL 9.1 ENSXETT00000101872 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092074 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090335 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079073 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075609 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048586 X. tropicalis
JGI 8.0 Xetrov14023162m X. tropicalis
JGI 7.2 Xelaev16047754m X. laevis.L
JGI 7.1 Xetro.E01459.1 X. tropicalis
JGI 7.1 Xetro.E01459.3 X. tropicalis
JGI 7.1 Xetro.E01459.4 X. tropicalis
JGI 7.1 Xetro.E01459.2 X. tropicalis
JGI 7.1 Xetro.E01459.5 X. tropicalis
JGI 6.0 XeXenL6RMv10019813m X. laevis.L
JGI 4.1 e_gw1.604.19.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048586 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048584 X. tropicalis
JGI 4.1 gw1.604.35.1 X. tropicalis
JGI 4.1 gw1.604.30.1 X. tropicalis
JGI 4.1 gw1.604.19.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040035 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_604000014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6040019 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6040008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6040003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6040014 X. tropicalis
JGI 4.1 e_gw1.604.35.1 X. tropicalis
JGI 4.1 e_gw1.604.30.1 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_002940340 X. tropicalis
IMAGE:6634406 BC072219 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091731 X. laevis.L

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7533456 CX434930 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu094h20 AL786745 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7557238 CX505878 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571691 CX512837 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6990212 CF218083 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9008484 EL837512 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9008484 EL837513 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7533456 CX434929 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557238 CX505877 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571691 CX512836 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGp998E038305 BX854913 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634406 BU908851 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3402986 BG364720 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3402986 BG020569 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10