Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (4) Nucleotides (77) Proteins (33) Interactants (43) Wiki
XB-GENEPAGE-489214

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for mbd4 - All

RefSeq mRNAs(3)
Models - Gene (13)
Models - mRNA (17)
mRNAs (5)
ESTs (11)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001044451 NM_001044451.1 methyl-CpG-binding domain protein 4 1643 bp NP_001037916 X. tropicalis
XM_018259048 XM_018259048.2 methyl-CpG-binding domain protein 4 isoform X1 1709 bp XP_018114537 X. laevis.L
XM_018259052 XM_018259052.2 methyl-CpG-binding domain protein 4 isoform X2 1702 bp XP_018114541 X. laevis.L

Models - Gene (13)

Source Version Model Species
NCBI 10.0 XBXT10g014160 X. tropicalis
NCBI 10.1 XBXL10_1g19938 X. laevis.L
ENSEMBL 10.0 mbd4 X. tropicalis
JGI 9.1 Xelaev18023941m.g X. laevis.L
Xenbase 9.1 gene1195 X. tropicalis
Xenbase 9.2 gene13008 X. laevis.L
ENSEMBL 9.1 mbd4 X. tropicalis
JGI 7.1 Xetro.D02356 X. tropicalis
JGI 6.0 XeXenL6RMv10038717m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000026622 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_196000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_196000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000035 X. tropicalis

mRNAs based on gene models(17)

Source Version Model Species
NCBI 10.0 mRNA070086 X. tropicalis
NCBI 10.1 XBmRNA36888 X. laevis.L
ENSEMBL 10.0 ENSXETT00000079574 X. tropicalis
ENSEMBL 10.0 ENSXETT00000056046 X. tropicalis
JGI 9.1 Xelaev18023941m X. laevis.L
Xenbase 9.1 rna3833 X. tropicalis
Xenbase 9.2 rna37803 X. laevis.L
ENSEMBL 9.1 ENSXETT00000079574 X. tropicalis
ENSEMBL 9.1 ENSXETT00000056046 X. tropicalis
JGI 7.1 Xetro.D02356.2 X. tropicalis
JGI 7.1 Xetro.D02356.3 X. tropicalis
JGI 7.1 Xetro.D02356.1 X. tropicalis
JGI 6.0 XeXenL6RMv10038717m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_196000007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056046 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_196000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000035 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001044451 X. tropicalis
TEgg143g23 CR760952 X. tropicalis
XR_001170413 X. tropicalis
XM_018259052 X. laevis.L
XM_018259048 X. laevis.L

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075b08 BX683486 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA027j03 CR567383 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA004k15 CR408155 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas081h13 AL777182 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu075b08 AL776308 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:4440885 BG512212 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TTbA004k15 CR408156 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas081h13 BX749134 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4440885 BG512655 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
PBX0111E12 AW641890 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL104n08 BJ076163 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25