Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (218) Proteins (106) Interactants (40) Wiki
XB-GENEPAGE-489869

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pkp4 - All

RefSeq mRNAs(22)
Models - Gene (41)
Models - mRNA (53)
mRNAs (26)
ESTs (46)

RefSeq mRNAs (22)

Accession Version name Length Protein Species
XM_012970592 XM_012970592. plakophilin-4 isoform X4 3954 bp XP_012826046 X. tropicalis
XM_012970589 XM_012970589. plakophilin-4 isoform X1 3942 bp XP_012826043 X. tropicalis
NM_001270690 NM_001270690. plakophilin-4 4140 bp NP_001257619 X. tropicalis
XM_031892752 XM_031892752. XP_031748612.1 plakophilin-4 isoform X2 4395 bp XP_031748612 X. tropicalis
XM_031892753 XM_031892753. XP_031748613.1 plakophilin-4 isoform X3 3581 bp XP_031748613 X. tropicalis
XM_041577701 XM_041577701. XP_041433635.1 plakophilin 4 S homeolog isoform X1 4568 bp XP_041433635 X. laevis.S
XM_018235793 XM_018235793. plakophilin-4 isoform X2 4722 bp XP_018091282 X. laevis.L
XM_018235794 XM_018235794. plakophilin-4 isoform X3 4656 bp XP_018091283 X. laevis.L
XM_018235795 XM_018235795. plakophilin-4 isoform X5 4510 bp XP_018091284 X. laevis.L
XM_018235796 XM_018235796. plakophilin-4 isoform X4 4642 bp XP_018091285 X. laevis.L
XM_018235797 XM_018235797. plakophilin-4 isoform X6 4650 bp XP_018091286 X. laevis.L
XM_018237355 XM_018237355. plakophilin 4 S homeolog isoform X3 4683 bp XP_018092844 X. laevis.S
XM_018237358 XM_018237358. plakophilin 4 S homeolog isoform X5 4611 bp XP_018092847 X. laevis.S
NM_001088997 NM_001088997. plakophilin 4 S homeolog 4058 bp NP_001082466 X. laevis.S
XM_041577702 XM_041577702. XP_041433636.1 plakophilin 4 S homeolog isoform X2 4561 bp XP_041433636 X. laevis.S
XM_041577703 XM_041577703. XP_041433637.1 plakophilin 4 S homeolog isoform X4 4495 bp XP_041433637 X. laevis.S
XM_041577704 XM_041577704. XP_041433638.1 plakophilin 4 S homeolog isoform X5 4637 bp XP_041433638 X. laevis.S
XM_041577705 XM_041577705. XP_041433639.1 plakophilin 4 S homeolog isoform X6 4468 bp XP_041433639 X. laevis.S
XM_041577706 XM_041577706. XP_041433640.1 plakophilin 4 S homeolog isoform X7 4378 bp XP_041433640 X. laevis.S
XM_041577707 XM_041577707. XP_041433641.1 plakophilin 4 S homeolog isoform X8 4299 bp XP_041433641 X. laevis.S
XM_041577708 XM_041577708. XP_041433642.1 plakophilin 4 S homeolog isoform X9 4489 bp XP_041433642 X. laevis.S
XM_018235792 XM_018235792. plakophilin-4 isoform X1 4728 bp XP_018091281 X. laevis.L

Models - Gene (41)

Source Version Model Species
NCBI 10.0 XBXT10g006504 X. tropicalis
NCBI 10.1 XBXL10_1g43449 X. laevis.S
NCBI 10.1 XBXL10_1g40618 X. laevis.L
ENSEMBL 10.0 pkp4 X. tropicalis
JGI 9.1 Xelaev18047119m.g X. laevis.S
JGI 9.1 Xelaev18044603m.g X. laevis.L
Xenbase 9.1 gene22629 X. tropicalis
Xenbase 9.2 gene3578 X. laevis.S
Xenbase 9.2 gene46192 X. laevis.L
ENSEMBL 9.1 pkp4 X. tropicalis
JGI 8.0 Xetrov14037094m.g X. tropicalis
JGI 7.1 Xetro.I00249 X. tropicalis
JGI 7.2 Xelaev16053165m.g X. laevis.S
JGI 6.0 XeXenL6RMv10023172m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010376 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_51000046 X. tropicalis
JGI 4.1 e_gw1.51.106.1 X. tropicalis
JGI 4.1 e_gw1.51.126.1 X. tropicalis
JGI 4.1 e_gw1.51.163.1 X. tropicalis
JGI 4.1 e_gw1.51.164.1 X. tropicalis
JGI 4.1 e_gw1.51.178.1 X. tropicalis
JGI 4.1 e_gw1.51.19.1 X. tropicalis
JGI 4.1 e_gw1.51.20.1 X. tropicalis
JGI 4.1 e_gw1.51.21.1 X. tropicalis
JGI 4.1 e_gw1.51.22.1 X. tropicalis
JGI 4.1 e_gw1.51.4.1 X. tropicalis
JGI 4.1 e_gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.106.1 X. tropicalis
JGI 4.1 gw1.51.126.1 X. tropicalis
JGI 4.1 gw1.51.163.1 X. tropicalis
JGI 4.1 gw1.51.164.1 X. tropicalis
JGI 4.1 gw1.51.178.1 X. tropicalis
JGI 4.1 gw1.51.19.1 X. tropicalis
JGI 4.1 gw1.51.20.1 X. tropicalis
JGI 4.1 gw1.51.21.1 X. tropicalis
JGI 4.1 gw1.51.22.1 X. tropicalis
JGI 4.1 gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.4.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510106 X. tropicalis

mRNAs based on gene models(53)

Source Version Model Species
NCBI 10.0 mRNA032124 X. tropicalis
NCBI 10.1 XBmRNA76441 X. laevis.L
NCBI 10.1 XBmRNA81718 X. laevis.S
ENSEMBL 10.0 ENSXETT00000099573 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062483 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086167 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089268 X. tropicalis
JGI 9.1 Xelaev18044603m X. laevis.L
JGI 9.1 Xelaev18047119m X. laevis.S
Xenbase 9.1 rna45719 X. tropicalis
Xenbase 9.2 rna90847 X. laevis.L
Xenbase 9.2 rna10418 X. laevis.S
ENSEMBL 9.1 ENSXETT00000091856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086167 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089268 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062483 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099573 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022793 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089297 X. tropicalis
JGI 8.0 Xetrov14037094m X. tropicalis
JGI 7.1 Xetro.I00249.2 X. tropicalis
JGI 7.1 Xetro.I00249.1 X. tropicalis
JGI 7.2 Xelaev16053165m X. laevis.S
JGI 6.0 XeXenL6RMv10023172m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_51000046 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022793 X. tropicalis
JGI 4.1 e_gw1.51.106.1 X. tropicalis
JGI 4.1 e_gw1.51.126.1 X. tropicalis
JGI 4.1 e_gw1.51.163.1 X. tropicalis
JGI 4.1 e_gw1.51.164.1 X. tropicalis
JGI 4.1 e_gw1.51.178.1 X. tropicalis
JGI 4.1 e_gw1.51.19.1 X. tropicalis
JGI 4.1 e_gw1.51.20.1 X. tropicalis
JGI 4.1 e_gw1.51.21.1 X. tropicalis
JGI 4.1 e_gw1.51.22.1 X. tropicalis
JGI 4.1 e_gw1.51.4.1 X. tropicalis
JGI 4.1 e_gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.106.1 X. tropicalis
JGI 4.1 gw1.51.126.1 X. tropicalis
JGI 4.1 gw1.51.163.1 X. tropicalis
JGI 4.1 gw1.51.164.1 X. tropicalis
JGI 4.1 gw1.51.178.1 X. tropicalis
JGI 4.1 gw1.51.19.1 X. tropicalis
JGI 4.1 gw1.51.20.1 X. tropicalis
JGI 4.1 gw1.51.21.1 X. tropicalis
JGI 4.1 gw1.51.22.1 X. tropicalis
JGI 4.1 gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.4.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510106 X. tropicalis

mRNAs from cDNA libraries (26)

Clone Accession Species Library Anatomy Stage
IMAGE:7669448 BC125740 X. tropicalis NIH_XGC_tropBrn4 brain frog
NM_001270690 X. tropicalis
XM_012970589 X. tropicalis
XM_012970592 X. tropicalis
XM_031892753 X. tropicalis
XM_031892752 X. tropicalis
IMAGE:3746576 BC099010 X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:4885141 BC048023 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
XNC2H21a-p0071.1.0. AF150745 X. laevis.S
NM_001088997 X. laevis.S
XM_018237358 X. laevis.S
XM_018237355 X. laevis.S
XM_018235797 X. laevis.L
XM_018235796 X. laevis.L
XM_018235795 X. laevis.L
XM_018235794 X. laevis.L
XM_018235793 X. laevis.L
XM_018235792 X. laevis.L
XM_041577708 X. laevis.S
XM_041577707 X. laevis.S
XM_041577706 X. laevis.S
XM_041577705 X. laevis.S
XM_041577704 X. laevis.S
XM_041577703 X. laevis.S
XM_041577702 X. laevis.S
XM_041577701 X. laevis.S

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7643645 CX798748 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7659398 CX839040 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7669448 CX875907 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7518434 CX750408 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7534101 CX428174 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610651 CX377215 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA019c21 CR422854 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069p14 CR439868 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA016e12 CR564186 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7528320 CX425246 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524217 CX438572 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559038 CX514093 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu116m18 AL801370 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093p20 AL804280 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA016d05 BX713968 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA020c21 CR421295 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA020c21 CR421296 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7643645 CX798747 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7659398 CX839039 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7669448 CX875906 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA019c21 CR422855 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA016e12 CR564187 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7610651 CX377214 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559038 CX514092 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu093p20 BX695865 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu116m18 BX696981 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA016d05 BX713969 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGp998L0514213 BX849694 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:7981705 DR729745 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk135d15ex DC046928 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl289k18 DC120247 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl258i17 DC111313 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6633628 BU908256 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6637013 BU911089 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL011p22 BJ029284 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL062g23 BJ059383 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL187e17 BJ618928 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL196n01 BJ621301 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3746576 BF427716 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL196n01 BJ638013 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk135d15ex DC013728 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl258i17 DC076610 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl289k18 DC085472 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL011p22 BJ044025 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL062g23 BJ077890 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL187e17 BJ635555 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5