Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (17) GO Terms (10) Nucleotides (97) Proteins (61) Interactants (321) Wiki
XB-GENEPAGE-490074

Show:     All X. tropicalis X. laevis

Nucleotide sequences for lhx3 - All

RefSeq mRNAs(8)
Models - Gene (28)
Models - mRNA (37)
mRNAs (11)
ESTs (7)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
XM_031891992 XM_031891992.1 XP_031747852.1 LIM/homeobox protein Lhx3 isoform X1 1647 bp XP_031747852 X. tropicalis
XM_031891993 XM_031891993.1 XP_031747853.1 LIM/homeobox protein Lhx3 isoform X2 1646 bp XP_031747853 X. tropicalis
XM_031891994 XM_031891994.1 XP_031747854.1 LIM/homeobox protein Lhx3 isoform X3 2119 bp XP_031747854 X. tropicalis
NM_001088154 NM_001088154.1 LIM/homeobox protein Lhx3 1344 bp NP_001081623 X. laevis.L
XM_018228702 XM_018228702.2 LIM/homeobox protein Lhx3 isoform X1 2404 bp XP_018084191 X. laevis.L
XM_018228703 XM_018228703.2 LIM/homeobox protein Lhx3 isoform X2 2403 bp XP_018084192 X. laevis.L
XM_018232573 XM_018232573.2 LIM/homeobox protein Lhx3-like isoform X2 2950 bp XP_018088062 X. laevis.S
XM_018232574 XM_018232574.2 LIM/homeobox protein Lhx3-like isoform X1 2847 bp XP_018088063 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g37538 X. laevis.S
NCBI 10.1 XBXL10_1g34291 X. laevis.L
NCBI 10.0 XBXT10g010967 X. tropicalis
ENSEMBL 10.0 lhx3 X. tropicalis
Xenbase 9.2 gene4784 X. laevis.L
Xenbase 9.2 gene15498 X. laevis.S
JGI 9.1 Xelaev18041521m.g X. laevis.S
JGI 9.1 Xelaev18038305m.g X. laevis.L
Xenbase 9.1 gene26722 X. tropicalis
ENSEMBL 9.1 qsox2 X. tropicalis
JGI 7.2 Xelaev16048889m.g X. laevis.L
JGI 7.1 Xetro.H00029 X. tropicalis
JGI 6.0 XeXenL6RMv10045543m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000726 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000016 X. tropicalis
JGI 4.1 gw1.137.19.1 X. tropicalis
JGI 4.1 gw1.137.222.1 X. tropicalis
JGI 4.1 gw1.137.306.1 X. tropicalis
JGI 4.1 gw1.137.322.1 X. tropicalis
JGI 4.1 gw1.137.317.1 X. tropicalis
JGI 4.1 e_gw1.137.19.1 X. tropicalis
JGI 4.1 e_gw1.137.210.1 X. tropicalis
JGI 4.1 e_gw1.137.222.1 X. tropicalis
JGI 4.1 e_gw1.137.306.1 X. tropicalis
JGI 4.1 e_gw1.137.317.1 X. tropicalis
JGI 4.1 e_gw1.137.322.1 X. tropicalis
JGI 4.1 gw1.137.210.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000058 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA70867 X. laevis.S
NCBI 10.1 XBmRNA64689 X. laevis.L
ENSEMBL 10.0 ENSXETT00000122762 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001620 X. tropicalis
NCBI 10.0 mRNA054353 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087763 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105159 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112501 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114845 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119657 X. tropicalis
Xenbase 9.2 rna45248 X. laevis.S
Xenbase 9.2 rna13958 X. laevis.L
Xenbase 9.1 rna52299 X. tropicalis
JGI 9.1 Xelaev18041521m X. laevis.S
JGI 9.1 Xelaev18038305m X. laevis.L
ENSEMBL 9.1 ENSXETT00000100626 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087763 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082585 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001620 X. tropicalis
JGI 7.2 Xelaev16048889m X. laevis.L
JGI 7.1 Xetro.H00029.1 X. tropicalis
JGI 6.0 XeXenL6RMv10045543m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_137000016 X. tropicalis
JGI 4.1 gw1.137.19.1 X. tropicalis
JGI 4.1 gw1.137.210.1 X. tropicalis
JGI 4.1 gw1.137.222.1 X. tropicalis
JGI 4.1 gw1.137.306.1 X. tropicalis
JGI 4.1 gw1.137.317.1 X. tropicalis
JGI 4.1 e_gw1.137.322.1 X. tropicalis
JGI 4.1 e_gw1.137.317.1 X. tropicalis
JGI 4.1 e_gw1.137.306.1 X. tropicalis
JGI 4.1 e_gw1.137.222.1 X. tropicalis
JGI 4.1 e_gw1.137.210.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001613 X. tropicalis
JGI 4.1 e_gw1.137.19.1 X. tropicalis
JGI 4.1 gw1.137.322.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000058 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_031891992 X. tropicalis
XM_031891993 X. tropicalis
XM_031891994 X. tropicalis
IMAGE:9041214 BC169580 X. laevis.L
NM_001088154 X. laevis.L
XM_018228702 X. laevis.L
XM_018228703 X. laevis.L
Z11589 X. laevis.L
pXH23-1, pXH22-2, pXH22-8 Z22702 X. laevis.L
XM_018232573 X. laevis.S
XM_018232574 X. laevis.S

ESTs (7)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA046l11 CR585071 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA012n04 BX707210 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xl320k06 DC129187 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4960123 BM192349 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
xlk77i22ex DC060174 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl318j11 DC128550 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl318j11 DC099792 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15