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Summary Expression Phenotypes Gene Literature (121) GO Terms (12) Nucleotides (137) Proteins (63) Interactants (328) Wiki
XB-GENEPAGE-493809

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atm - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (28)
Models - mRNA (43)
mRNAs (2)
ESTs (20)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002934928 XM_002934928. serine-protein kinase ATM isoform X1 10039 bp XP_002934974 X. tropicalis
XM_031897311 XM_031897311. XP_031753171.1 serine-protein kinase ATM isoform X2 8194 bp XP_031753171 X. tropicalis

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g011459 X. tropicalis
ENSEMBL 10.0 atm X. tropicalis
Xenbase 9.1 gene27343 X. tropicalis
ENSEMBL 9.1 atm X. tropicalis
JGI 8.0 Xetrov14010786m.g X. tropicalis
JGI 7.1 Xetro.B01961 X. tropicalis
ENSEMBL 4.1 ENSXETG00000014471 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190055 X. tropicalis
JGI 4.1 gw1.119.17.1 X. tropicalis
JGI 4.1 e_gw1.119.17.1 X. tropicalis
JGI 4.1 e_gw1.119.2.1 X. tropicalis
JGI 4.1 e_gw1.119.292.1 X. tropicalis
JGI 4.1 e_gw1.119.293.1 X. tropicalis
JGI 4.1 e_gw1.119.314.1 X. tropicalis
JGI 4.1 e_gw1.119.316.1 X. tropicalis
JGI 4.1 gw1.119.2.1 X. tropicalis
JGI 4.1 gw1.119.292.1 X. tropicalis
JGI 4.1 gw1.119.293.1 X. tropicalis
JGI 4.1 gw1.119.314.1 X. tropicalis
JGI 4.1 gw1.119.316.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190292 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190313 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190315 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1190018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000056 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_119000018 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.0 mRNA056910 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093819 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103975 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073403 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099326 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103606 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031684 X. tropicalis
Xenbase 9.1 rna53270 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076120 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097617 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104514 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084357 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103352 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069432 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093819 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031676 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074941 X. tropicalis
JGI 8.0 Xetrov14010786m X. tropicalis
JGI 7.1 Xetro.B01961.3 X. tropicalis
JGI 7.1 Xetro.B01961.2 X. tropicalis
JGI 7.1 Xetro.B01961.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190055 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031676 X. tropicalis
JGI 4.1 e_gw1.119.17.1 X. tropicalis
JGI 4.1 e_gw1.119.2.1 X. tropicalis
JGI 4.1 e_gw1.119.292.1 X. tropicalis
JGI 4.1 e_gw1.119.293.1 X. tropicalis
JGI 4.1 e_gw1.119.314.1 X. tropicalis
JGI 4.1 e_gw1.119.316.1 X. tropicalis
JGI 4.1 gw1.119.17.1 X. tropicalis
JGI 4.1 gw1.119.2.1 X. tropicalis
JGI 4.1 gw1.119.292.1 X. tropicalis
JGI 4.1 gw1.119.293.1 X. tropicalis
JGI 4.1 gw1.119.314.1 X. tropicalis
JGI 4.1 gw1.119.316.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190292 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190313 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190315 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1190018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000056 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_119000018 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
XM_002934928 X. tropicalis
XM_031897311 X. tropicalis

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9016975 EL864042 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8957169 EL662844 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8954661 EL662837 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7789793 CX323121 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629922 CX369500 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7551107 CX509939 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7690716 CX915886 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7646109 CX803654 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642791 CX797456 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641059 CX794006 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas101f05 AL956265 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6990524 CF217583 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990524 CF217582 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9016975 EL864043 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7690716 CX915885 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7646109 CX803653 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641059 CX794005 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642791 CX797455 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7551107 CX509938 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas101f05 BX756777 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12