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Summary Expression Phenotypes Gene Literature (2) GO Terms (24) Nucleotides (128) Proteins (59) Interactants (41) Wiki
XB-GENEPAGE-5757511

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hace1 - All

RefSeq mRNAs(4)
Models - Gene (28)
Models - mRNA (38)
mRNAs (7)
ESTs (30)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001045804 NM_001045804.2 E3 ubiquitin-protein ligase HACE1 3658 bp NP_001039269 X. tropicalis
XM_012963123 XM_012963123.3 E3 ubiquitin-protein ligase HACE1 isoform X1 3870 bp XP_012818577 X. tropicalis
NM_001093608 NM_001093608.1 E3 ubiquitin-protein ligase HACE1 3781 bp NP_001087077 X. laevis.L
XM_018261979 XM_018261979.2 E3 ubiquitin-protein ligase HACE1 isoform X1 4787 bp XP_018117468 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g23519 X. laevis.L
NCBI 10.0 XBXT10g011318 X. tropicalis
ENSEMBL 10.0 hace1 X. tropicalis
Xenbase 9.2 gene9691 X. laevis.L
JGI 9.1 Xelaev18027239m.g X. laevis.L
Xenbase 9.1 gene3715 X. tropicalis
ENSEMBL 9.1 hace1 X. tropicalis
JGI 8.0 Xetrov14022745m.g X. tropicalis
JGI 7.2 Xelaev16076430m.g X. laevis.L
JGI 7.1 Xetro.E00625 X. tropicalis
JGI 6.0 XeXenL6RMv10050223m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013282 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_526000011 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_526000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_526000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_526000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5260001 X. tropicalis
JGI 4.1 e_gw1.526.21.1 X. tropicalis
JGI 4.1 e_gw1.526.24.1 X. tropicalis
JGI 4.1 e_gw1.526.33.1 X. tropicalis
JGI 4.1 gw1.526.21.1 X. tropicalis
JGI 4.1 gw1.526.24.1 X. tropicalis
JGI 4.1 gw1.526.33.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5260003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5260021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5260024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5260033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5260011 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA43913 X. laevis.L
ENSEMBL 10.0 ENSXETT00000096690 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029095 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099336 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104647 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087752 X. tropicalis
NCBI 10.0 mRNA056173 X. tropicalis
Xenbase 9.2 rna28195 X. laevis.L
ENSEMBL 9.1 ENSXETT00000099336 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104647 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029095 X. tropicalis
Xenbase 9.1 rna12171 X. tropicalis
JGI 9.1 Xelaev18027239m X. laevis.L
ENSEMBL 9.1 ENSXETT00000087752 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096690 X. tropicalis
JGI 8.0 Xetrov14022745m X. tropicalis
JGI 7.2 Xelaev16076430m X. laevis.L
JGI 7.1 Xetro.E00625.2 X. tropicalis
JGI 7.1 Xetro.E00625.1 X. tropicalis
JGI 7.1 Xetro.E00625.3 X. tropicalis
JGI 6.0 XeXenL6RMv10050223m X. laevis.L
JGI 4.1 estExt_Genewise1.C_5260033 X. tropicalis
JGI 4.1 e_gw1.526.24.1 X. tropicalis
JGI 4.1 e_gw1.526.33.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029095 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5260011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5260001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5260003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5260021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5260024 X. tropicalis
JGI 4.1 e_gw1.526.21.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_526000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_526000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_526000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_526000002 X. tropicalis
JGI 4.1 gw1.526.21.1 X. tropicalis
JGI 4.1 gw1.526.24.1 X. tropicalis
JGI 4.1 gw1.526.33.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TEgg040h18 CR942795 X. tropicalis
NM_001045804 X. tropicalis
XM_012963123 X. tropicalis
AB894419 X. laevis.L
IMAGE:6866272 BC077993 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093608 X. laevis.L
XM_018261979 X. laevis.L

ESTs (30)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7694646 CX922978 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11765 CX927889 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas079e12 AL775040 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095e12 AL968393 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7718329 CX980796 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7744599 DN037980 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7713261 CX970849 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7690105 CX914214 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7702760 CX938517 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9077 CX957142 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas039a14 AL653976 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7702760 CX938516 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694646 CX922977 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO9077 CX957141 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7690105 CX914213 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7713261 CX970848 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7744599 DN037979 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:3402869 BG364683 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6866272 CA794031 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL145i09 BJ094448 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl312p21 DC126932 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL021o11 BJ035370 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL046e20 BJ040379 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6873587 CB198602 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL090c21 BJ074455 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL046e20 BJ054760 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL021o11 BJ049992 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl312p21 DC091842 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL090c21 BJ091852 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6873587 CB756311 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62