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Summary Expression Phenotypes Gene Literature (0) GO Terms (7) Nucleotides (139) Proteins (42) Interactants (13) Wiki
XB-GENEPAGE-5786074

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sigmar1 - All

Models - Gene (33)
Models - mRNA (33)
mRNAs (4)
ESTs (39)

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g005316 X. tropicalis
NCBI 10.1 XBXL10_1g3464 X. laevis.L
ENSEMBL 10.0 sigmar1 X. tropicalis
JGI 9.1 Xelaev18008617m.g X. laevis.L
Xenbase 9.1 gene23732 X. tropicalis
Xenbase 9.2 gene19262 X. laevis.L
JGI 7.1 Xetro.K03117 X. tropicalis
JGI 7.2 Xelaev16040767m.g X. laevis.L
JGI 6.0 XeXenL6RMv10027843m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000015605 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_23750001 X. tropicalis
JGI 4.1 e_gw1.2375.10.1 X. tropicalis
JGI 4.1 e_gw1.2375.11.1 X. tropicalis
JGI 4.1 e_gw1.2375.3.1 X. tropicalis
JGI 4.1 e_gw1.2375.5.1 X. tropicalis
JGI 4.1 e_gw1.2375.8.1 X. tropicalis
JGI 4.1 e_gw1.2375.9.1 X. tropicalis
JGI 4.1 gw1.2375.10.1 X. tropicalis
JGI 4.1 gw1.2375.11.1 X. tropicalis
JGI 4.1 gw1.2375.3.1 X. tropicalis
JGI 4.1 gw1.2375.5.1 X. tropicalis
JGI 4.1 gw1.2375.8.1 X. tropicalis
JGI 4.1 gw1.2375.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_23750001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_23750010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_23750011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_23750001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_23750002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_23750001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2375000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2375000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2375000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2375000001 X. tropicalis

Models - mRNA (33)

Source Version Model Species
NCBI 10.0 mRNA026422 X. tropicalis
NCBI 10.1 XBmRNA6362 X. laevis.L
ENSEMBL 10.0 ENSXETT00000117464 X. tropicalis
JGI 9.1 Xelaev18008617m X. laevis.L
Xenbase 9.1 rna47484 X. tropicalis
Xenbase 9.2 rna56267 X. laevis.L
JGI 7.1 Xetro.K03117.1 X. tropicalis
JGI 7.2 Xelaev16040767m X. laevis.L
JGI 6.0 XeXenL6RMv10027843m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_23750001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034034 X. tropicalis
JGI 4.1 e_gw1.2375.10.1 X. tropicalis
JGI 4.1 e_gw1.2375.11.1 X. tropicalis
JGI 4.1 e_gw1.2375.3.1 X. tropicalis
JGI 4.1 e_gw1.2375.5.1 X. tropicalis
JGI 4.1 e_gw1.2375.8.1 X. tropicalis
JGI 4.1 e_gw1.2375.9.1 X. tropicalis
JGI 4.1 gw1.2375.10.1 X. tropicalis
JGI 4.1 gw1.2375.11.1 X. tropicalis
JGI 4.1 gw1.2375.3.1 X. tropicalis
JGI 4.1 gw1.2375.5.1 X. tropicalis
JGI 4.1 gw1.2375.8.1 X. tropicalis
JGI 4.1 gw1.2375.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_23750001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_23750010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_23750011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_23750001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_23750002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_23750001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2375000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2375000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2375000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2375000001 X. tropicalis

mRNAs (4)

Clone Accession Species Library Anatomy Stage
NM_001008206 X. tropicalis
IMAGE:7015767 BC081292 X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:5511795 BC077894 X. laevis.L
NM_001093544 X. laevis.L

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6999312 CF344309 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:8915176 EL827851 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO10596 CX959952 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st86j05 DC188088 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs35A07 CN091392 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8963362 EL663840 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8852954 EL814731 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7686943 CX908204 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7703544 CX940018 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7567693 CX508311 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7740913 DN030931 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7851700 DT391360 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7015767 CF523392 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TNeu029l05 AL646755 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095p01 AL803471 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas083f24 AL774515 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA007m17 CR409221 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074e20 CR444043 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6985580 CF152632 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6999312 CF344308 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:8852954 EL814732 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915176 EL827852 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst86j05 DC157977 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs30A08 CN088540 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs35A07 CN091391 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7511471 CX740335 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7703544 CX940017 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7740913 DN030930 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7686943 CX908203 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7851700 DT391359 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TNeu095p01 BX693958 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr26H05 CN104823 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7567693 CX508310 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5572039 BQ737530 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL058b14 BJ058031 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL051d17 BJ068942 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103i07 BJ075741 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL058b14 BJ076576 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL051d17 BJ085843 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25