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Summary Expression Phenotypes Gene Literature (4) GO Terms (0) Nucleotides (135) Proteins (36) Interactants (45) Wiki
XB-GENEPAGE-5904768

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for paaf1 - All

RefSeq mRNAs(6)
Models - Gene (18)
Models - mRNA (18)
mRNAs (9)
ESTs (55)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
NM_001078768 NM_001078768. proteasomal ATPase-associated factor 1 1415 bp NP_001072236 X. tropicalis
XM_031896097 XM_031896097. XP_031751957.1 proteasomal ATPase-associated factor 1 isoform X1 1352 bp XP_031751957 X. tropicalis
XM_031896098 XM_031896098. XP_031751958.1 proteasomal ATPase-associated factor 1 isoform X2 1326 bp XP_031751958 X. tropicalis
XM_031896100 XM_031896100. XP_031751960.1 proteasomal ATPase-associated factor 1 isoform X3 1574 bp XP_031751960 X. tropicalis
XM_031896101 XM_031896101. XP_031751961.1 proteasomal ATPase-associated factor 1 isoform X4 1262 bp XP_031751961 X. tropicalis
NM_001088327 NM_001088327. proteasomal ATPase associated factor 1 S homeolog 1478 bp NP_001081796 X. laevis.S

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g015286 X. tropicalis
NCBI 10.1 XBXL10_1g11205 X. laevis.S
JGI 9.1 Xelaev18016429m.g X. laevis.S
Xenbase 9.1 gene25515 X. tropicalis
Xenbase 9.2 gene41151 X. laevis.S
JGI 8.0 Xetrov14044649m.g X. tropicalis
JGI 7.1 Xetro.B02415 X. tropicalis
JGI 7.2 Xelaev16025210m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032919m.g X. laevis.S
JGI 6.0 XeXenL6RMv10045601m.g X. laevis.S
JGI 4.1 e_gw1.982.16.1 X. tropicalis
JGI 4.1 e_gw1.982.37.1 X. tropicalis
JGI 4.1 e_gw1.982.38.1 X. tropicalis
JGI 4.1 gw1.982.16.1 X. tropicalis
JGI 4.1 gw1.982.37.1 X. tropicalis
JGI 4.1 gw1.982.38.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9820001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_982000001 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
NCBI 10.0 mRNA075601 X. tropicalis
NCBI 10.1 XBmRNA21049 X. laevis.S
JGI 9.1 Xelaev18016429m X. laevis.S
Xenbase 9.1 rna50414 X. tropicalis
Xenbase 9.2 rna83479 X. laevis.S
JGI 8.0 Xetrov14044649m X. tropicalis
JGI 7.1 Xetro.B02415.1 X. tropicalis
JGI 7.2 Xelaev16025210m X. laevis.S
JGI 6.0 XeXenL6RMv10032919m X. laevis.S
JGI 6.0 XeXenL6RMv10045601m X. laevis.S
JGI 4.1 e_gw1.982.16.1 X. tropicalis
JGI 4.1 e_gw1.982.37.1 X. tropicalis
JGI 4.1 e_gw1.982.38.1 X. tropicalis
JGI 4.1 gw1.982.16.1 X. tropicalis
JGI 4.1 gw1.982.37.1 X. tropicalis
JGI 4.1 gw1.982.38.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9820001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_982000001 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001078768 X. tropicalis
IMAGE:7797229 BC118827 X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
XM_031896101 X. tropicalis
XM_031896100 X. tropicalis
XM_031896098 X. tropicalis
XM_031896097 X. tropicalis
IMAGE:7204433 BC088671 X. laevis.S
U41857 X. laevis.S
NM_001088327 X. laevis.S

ESTs (55)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7648084 CX807474 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8908092 EL801929 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8913770 EL826171 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8955995 EL660220 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8954991 EL662475 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8863043 EL704888 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8863067 EL706650 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8929752 EL679490 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8905510 EL797896 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7752243 DN052370 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
CAAN11111 CX926674 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7624975 CX402630 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8949422 EG652679 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
xtbs25J19 CN085427 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26L05 CN086064 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7747226 DN043281 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752542 DN053427 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7797229 DR885135 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7648907 CX808540 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7662998 CX846140 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7663780 CX848291 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665193 CX850141 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7743365 DN035941 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7746441 DN041561 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7640986 CX794500 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646905 CX805210 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648161 CX807000 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8908092 EL801930 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8913770 EL826172 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8863043 EL704887 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8863067 EL706649 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8929752 EL679489 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8905510 EL797897 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7662998 CX846139 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN11111 CX926673 3' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs25J19 CN085426 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26L05 CN086063 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7747226 DN043280 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752243 DN052369 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752542 DN053426 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7640986 CX794499 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648161 CX806999 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648084 CX807473 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7797229 DR885134 3' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7648907 CX808539 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7665193 CX850140 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7743365 DN035940 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7746441 DN041560 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
xthr02M22 CN106968 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7624975 CX402629 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646905 CX805209 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
XENOPUS_SOURCE_ID:xlnga001b18 AW198668 5' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
xl300h06 DC123188 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XENOPUS_SOURCE_ID:xlnga001b18 AW148186 3' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
rxl300h06 DC088321 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15