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Summary Expression Phenotypes Gene Literature (3) GO Terms (38) Nucleotides (160) Proteins (63) Interactants (76) Wiki
XB-GENEPAGE-5910330

Show:     All X. tropicalis X. laevis

Nucleotide sequences for irf6.2 - All

RefSeq mRNAs(14)
Models - Gene (32)
Models - mRNA (34)
mRNAs (18)
ESTs (39)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
NM_001030389 NM_001030389.1 interferon regulatory factor 6, gene 2 2778 bp NP_001025560 X. tropicalis
XM_012963069 XM_012963069.3 interferon regulatory factor 6, gene 2 isoform X1 3058 bp XP_012818523 X. tropicalis
XM_012963070 XM_012963070.3 interferon regulatory factor 6, gene 2 isoform X2 3057 bp XP_012818524 X. tropicalis
XM_012963071 XM_012963071.3 interferon regulatory factor 6, gene 2 isoform X3 2826 bp XP_012818525 X. tropicalis
XM_012963072 XM_012963072.3 interferon regulatory factor 6, gene 2 isoform X4 2824 bp XP_012818526 X. tropicalis
NM_001087746 NM_001087746.1 interferon regulatory factor 6, gene 2 L homeolog 1886 bp NP_001081215 X. laevis.L
XM_018261698 XM_018261698.2 interferon regulatory factor 6, gene 2 L homeolog isoform X1 1998 bp XP_018117187 X. laevis.L
XM_018261699 XM_018261699.2 interferon regulatory factor 6, gene 2 L homeolog isoform X2 1969 bp XP_018117188 X. laevis.L
XM_018261700 XM_018261700.2 interferon regulatory factor 6, gene 2 L homeolog isoform X3 1966 bp XP_018117189 X. laevis.L
XM_041562096 XM_041562096.1 XP_041418030.1 interferon regulatory factor 6, gene 2 L homeolog isoform X1 2130 bp XP_041418030 X. laevis.L
XM_018265463 XM_018265463.2 interferon regulatory factor 6 isoform X1 2871 bp XP_018120952 X. laevis.S
XM_018265463 interferon regulatory factor 6 isoform X1 2871 bp XP_018120952 X. laevis.S
XM_018265464 XM_018265464.2 interferon regulatory factor 6 isoform X2 3188 bp XP_018120953 X. laevis.S
XM_018265464 interferon regulatory factor 6 isoform X2 3188 bp XP_018120953 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g23615 X. laevis.L
NCBI 10.0 XBXT10g005092 X. tropicalis
NCBI 10.1 XBXL10_1g25578 X. laevis.S
ENSEMBL 10.0 irf6.2 X. tropicalis
Xenbase 9.2 gene5597 X. laevis.L
Xenbase 9.1 gene7629 X. tropicalis
ENSEMBL 9.1 irf6.2 X. tropicalis
JGI 8.0 Xetrov14022668m.g X. tropicalis
JGI 7.2 Xelaev16013625m.g X. laevis.L
JGI 7.1 Xetro.E00541 X. tropicalis
JGI 6.0 XeXenL6RMv10039426m.g X. laevis.L
JGI 6.0 XeXenL6RMv10041252m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018661 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3750008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3750029 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_375000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_375000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_375000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_375000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_375000008 X. tropicalis
JGI 4.1 e_gw1.375.42.1 X. tropicalis
JGI 4.1 e_gw1.375.43.1 X. tropicalis
JGI 4.1 e_gw1.375.44.1 X. tropicalis
JGI 4.1 gw1.375.42.1 X. tropicalis
JGI 4.1 gw1.375.43.1 X. tropicalis
JGI 4.1 gw1.375.44.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3750012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3750042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3750043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3750044 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3750008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3750028 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA44097 X. laevis.L
NCBI 10.1 XBmRNA47760 X. laevis.S
NCBI 10.0 mRNA025261 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040399 X. tropicalis
Xenbase 9.2 rna16383 X. laevis.L
Xenbase 9.1 rna24568 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040399 X. tropicalis
JGI 8.0 Xetrov14022668m X. tropicalis
JGI 7.2 Xelaev16013625m X. laevis.L
JGI 7.1 Xetro.E00541.1 X. tropicalis
JGI 7.1 Xetro.E00541.2 X. tropicalis
JGI 7.1 Xetro.E00541.3 X. tropicalis
JGI 6.0 XeXenL6RMv10039426m X. laevis.L
JGI 6.0 XeXenL6RMv10041252m X. laevis.L
JGI 4.1 estExt_Genewise1.C_3750044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3750043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3750042 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3750012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3750008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3750029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3750028 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3750008 X. tropicalis
JGI 4.1 e_gw1.375.44.1 X. tropicalis
JGI 4.1 e_gw1.375.43.1 X. tropicalis
JGI 4.1 e_gw1.375.42.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040399 X. tropicalis
JGI 4.1 gw1.375.43.1 X. tropicalis
JGI 4.1 gw1.375.44.1 X. tropicalis
JGI 4.1 gw1.375.42.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_375000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_375000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_375000029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_375000028 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_375000008 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:5308152 BC090601 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas087d13 CR848098 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001030389 X. tropicalis
XM_012963069 X. tropicalis
XM_012963070 X. tropicalis
XM_012963071 X. tropicalis
XM_012963072 X. tropicalis
IMAGE:7982555 BC108593 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
D86492 X. laevis.L
NM_001087746 X. laevis.L
XM_018261698 X. laevis.L
XM_018261699 X. laevis.L
XM_018261700 X. laevis.L
XM_041562096 X. laevis.L
XM_018265463 X. laevis.S
XM_018265463 X. laevis.S
XM_018265464 X. laevis.S
XM_018265464 X. laevis.S

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu026l19 AL641030 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu110d17 AL797408 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas028l22 AL652553 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079n09 AL774825 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080h21 AL774875 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087d13 AL955037 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095n09 AL962496 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c09 AL967810 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096h21 AL969575 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7572813 CX435920 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542431 CX449701 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551205 CX509956 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7801423 DR834256 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TNeu042h18 AL662778 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5308152 BQ389789 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TTbA034o19 CR425149 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu110d17 BX696589 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7801423 DR834255 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:5308152 BQ389788 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas080h21 BX750736 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7748441 DN044735 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
rst115j08 DC164679 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas087d13 BX752828 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c09 BX753288 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096h21 BX755040 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7572813 CX435919 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551205 CX509955 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542431 CX449700 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL054o19 BJ069895 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0148D08 AW645141 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5155123 CA789694 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
BG409512 BG409512 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
XL198n14 BJ621843 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl274g17 DC115954 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL028n17 BJ034518 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL077e17 BJ063769 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0143E10 AW644732 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4084869 BI447042 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
rxl261d15 DC077371 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15