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Summary Expression Phenotypes Gene Literature (2) GO Terms (4) Nucleotides (183) Proteins (64) Interactants (27) Wiki
XB-GENEPAGE-5942578

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rfx5 - All

Models - Gene (17)
Models - mRNA (21)
mRNAs (26)
ESTs (74)

Models - Gene (17)

Source Version Model Species
NCBI 10.0 XBXT10g006698 X. tropicalis
NCBI 10.1 XBXL10_1g37010 X. laevis.L
NCBI 10.1 XBXL10_1g38840 X. laevis.S
ENSEMBL 10.0 rfx5 X. tropicalis
Xenbase 9.2 gene46014 X. laevis.L
Xenbase 9.2 gene46883 X. laevis.S
JGI 7.2 Xelaev16006570m.g X. laevis.L
JGI 6.0 XeXenL6RMv10046625m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027541 X. tropicalis
JGI 4.1 e_gw1.2034.2.1 X. tropicalis
JGI 4.1 e_gw1.2034.1.1 X. tropicalis
JGI 4.1 gw1.2034.1.1 X. tropicalis
JGI 4.1 gw1.2034.2.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20340001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20340001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2034000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2034000001 X. tropicalis

Models - mRNA (21)

Source Version Model Species
NCBI 10.0 mRNA033144 X. tropicalis
NCBI 10.1 XBmRNA69811 X. laevis.L
NCBI 10.1 XBmRNA73286 X. laevis.S
ENSEMBL 10.0 ENSXETT00000119627 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118726 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124008 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120782 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109210 X. tropicalis
Xenbase 9.2 rna90612 X. laevis.L
Xenbase 9.2 rna91836 X. laevis.S
JGI 7.2 Xelaev16006570m X. laevis.L
JGI 6.0 XeXenL6RMv10046625m X. laevis.L
JGI 4.1 e_gw1.2034.2.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057417 X. tropicalis
JGI 4.1 e_gw1.2034.1.1 X. tropicalis
JGI 4.1 gw1.2034.1.1 X. tropicalis
JGI 4.1 gw1.2034.2.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20340001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20340001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2034000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2034000001 X. tropicalis

mRNAs (26)

Clone Accession Species Library Anatomy Stage
IMAGE:5336418 BC064876 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_001083343 X. tropicalis
IMAGE:7619570 BC135604 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_031890299 X. tropicalis
XM_031890298 X. tropicalis
XM_031890297 X. tropicalis
XM_031890296 X. tropicalis
IMAGE:6632417 BC068779 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091204 X. laevis.L
XM_018233629 X. laevis.S
XM_018233628 X. laevis.S
XM_018233627 X. laevis.S
XM_018233625 X. laevis.S
XM_018233624 X. laevis.S
XM_041573835 X. laevis.L
XM_041573834 X. laevis.L
XM_041573833 X. laevis.L
XM_041573832 X. laevis.L
XM_041573831 X. laevis.L
XM_041573830 X. laevis.L
XM_041573829 X. laevis.L
XM_041573828 X. laevis.L
XM_041573827 X. laevis.L
XM_041573826 X. laevis.L
XM_041573825 X. laevis.L
XM_041573824 X. laevis.L

ESTs (74)

Clone Accession 5'/3' Species Library Anatomy Stage
st44i14 DC177788 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3k23 DC174054 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8966822 EL656730 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8923000 EL674983 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8856794 EL820209 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918229 EL831954 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO9525 CX957964 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO12294 CX963094 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st34d10 DC173103 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO2812 CX933306 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7601529 CX364344 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618273 CX362876 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619570 CX346954 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634552 CX337922 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7316 CX940781 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8892 CX956801 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9510 CX957936 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7658049 CX836524 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686900 CX908586 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688879 CX911883 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692259 CX918441 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5336418 BQ522176 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu048j15 AL658802 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA055p23 BX733622 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA039p06 BX736328 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas125f05 AL961944 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7634552 CX337921 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8923000 EL674982 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8856794 EL820210 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918229 EL831955 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO12294 CX963093 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7316 CX940780 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8892 CX956800 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9525 CX957963 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rst34d10 DC142841 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst3k23 DC143760 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst44i14 DC147497 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO2812 CX933305 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9510 CX957935 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7619570 CX346953 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601529 CX364343 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618273 DR897652 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7686900 CX908585 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688879 CX911882 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692259 CX918440 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5336418 BQ522175 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas125f05 BX757769 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7299120 CO382683 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL518b10ex BP706538 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL109f03 BJ073232 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7979637 DR721392 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk140o24ex DC048798 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl228n08 DC102303 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL143j04 BJ093805 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL151h19 BJ095771 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152a01 BJ095926 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL165a09 BJ613746 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL181e05 BJ617558 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3749187 BF614951 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:6632417 BU907292 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6862596 CA986342 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL038l22 BJ039862 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL037l22 BJ036886 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL067m09 BJ061033 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108f03 BJ072913 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3437030 BF613410 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL165a09 BJ630364 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL181e05 BJ634042 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk140o24ex DC015530 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL108f03 BJ089858 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL151h19 BJ099652 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152a01 BJ100251 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL038l22 BJ051895 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL067m09 BJ079239 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25