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Summary Expression Phenotypes Gene Literature (34) GO Terms (31) Nucleotides (253) Proteins (37) Interactants (433) Wiki
XB-GENEPAGE-6457627

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sdc2 - All

RefSeq mRNAs(5)
Models - Gene (14)
Models - mRNA (14)
mRNAs (12)
ESTs (132)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001017163 NM_001017163.2 syndecan-2 precursor 951 bp NP_001017163 X. tropicalis
NM_001086751 NM_001086751.1 syndecan-2-A precursor 1501 bp NP_001080220 X. laevis.L
NM_001087471 NM_001087471.1 syndecan-2-B precursor 1157 bp NP_001080940 X. laevis.S
XM_041567087 XM_041567087.1 XP_041423021.1 syndecan-2-B isoform X1 2866 bp XP_041423021 X. laevis.S
XM_041567088 XM_041567088.1 XP_041423022.1 syndecan-2-B isoform X2 3239 bp XP_041423022 X. laevis.S

Models - Gene (14)

Source Version Model Species
NCBI 10.1 XBXL10_1g29708 X. laevis.S
NCBI 10.1 XBXL10_1g28197 X. laevis.L
NCBI 10.0 XBXT10g009415 X. tropicalis
ENSEMBL 10.0 sdc2 X. tropicalis
Xenbase 9.2 gene12838 X. laevis.L
Xenbase 9.2 gene13181 X. laevis.S
JGI 9.1 Xelaev18032236m.g X. laevis.L
JGI 9.1 Xelaev18033900m.g X. laevis.S
Xenbase 9.1 gene866 X. tropicalis
ENSEMBL 9.1 sdc2 X. tropicalis
JGI 7.2 Xelaev16066454m.g X. laevis.L
JGI 7.2 Xelaev16045125m.g X. laevis.S
JGI 7.1 Xetro.F00264 X. tropicalis
JGI 6.0 XeXenL6RMv10006122m.g X. laevis.L

mRNAs based on gene models(14)

Source Version Model Species
NCBI 10.1 XBmRNA55908 X. laevis.S
NCBI 10.1 XBmRNA52948 X. laevis.L
NCBI 10.0 mRNA046486 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069117 X. tropicalis
Xenbase 9.2 rna38334 X. laevis.S
Xenbase 9.2 rna37307 X. laevis.L
Xenbase 9.1 rna2765 X. tropicalis
JGI 9.1 Xelaev18032236m X. laevis.L
JGI 9.1 Xelaev18033900m X. laevis.S
ENSEMBL 9.1 ENSXETT00000069117 X. tropicalis
JGI 7.2 Xelaev16045125m X. laevis.S
JGI 7.2 Xelaev16066454m X. laevis.L
JGI 7.1 Xetro.F00264.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006122m X. laevis.L

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
TTpA010f20 CR760821 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001017163 X. tropicalis
NM_001086751 X. laevis.L
XS-2 U24433 X. laevis.L
S10-55-F11 AF549999 X. laevis.S
IMAGE:4173970 BC071080 X. laevis.S
IMAGE:4888131 BC041490 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
U41760 X. laevis.S
XM_041567087 X. laevis.S
XM_041567088 X. laevis.S
NM_001087471 X. laevis.S
IMAGE:7981633 BC106318 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19

ESTs (132)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA028i16 BX743152 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA075d19 BX739481 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu020e17 AL637792 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070p11 AL779284 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079l10 AL785011 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140m02 AL802490 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7706915 CX958892 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7452 CX941021 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8869603 EL710165 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7518741 CX750801 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTpA074i18 BX736214 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA010f20 BX707850 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA065p13 CR445024 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA015b18 CR421191 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5379503 BQ523481 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8870669 EL711989 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8911949 EL808108 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
st12n05 DC166429 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15o16 DC167364 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34e22 DC173127 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas002g24 AL595129 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas011a10 AL628945 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029n21 AL652291 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044i10 AL654512 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8865492 EL703292 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7532063 CX432724 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8885815 EL842183 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7538029 CX447122 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8853709 EL815402 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7541780 CX448837 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7849919 DT387419 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7522724 CX472068 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7801417 DR834538 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7563290 CX473375 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733816 DN018459 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7548041 CX489486 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7795483 CX780595 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795843 CX780420 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795484 CX780387 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795751 CX779998 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7002706 CF374753 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
xtbs09E14 CN094163 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs06M20 CN092287 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19M23 CN081249 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7625447 CX403508 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625245 CX402829 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4737 CX400904 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607468 CX368198 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616532 CX361120 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT648 CX359417 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634930 CX338435 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7563290 CX473374 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8869603 EL710164 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8911949 EL808109 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst12n05 DC136369 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst15o16 DC137302 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst30j11 DC141836 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7532063 CX432723 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538029 CX447121 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541780 CX448836 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522724 CX472067 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8865492 EL703291 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7548041 CX489485 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu079l10 BX686059 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107l04 BX699311 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7518741 CX750800 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:5379503 BQ523480 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA010f20 BX707851 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA028i16 BX743153 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7634930 CX338434 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT648 CX359416 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616532 CX361119 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607468 CX368197 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4737 CX400903 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625245 CX402828 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625447 CX403507 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584502 CX415631 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs19M23 CN081248 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7795843 CX779824 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795484 CX779871 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795751 CX779906 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795729 CX780336 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795483 CX780693 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAO7452 CX941020 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706915 CX958891 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7733816 DN018458 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7801417 DR834537 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7849919 DT387418 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8853709 EL815403 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8885815 EL842184 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xlk81f17ex DC061703 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3377746 BE190020 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL456k14ex BP688191 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5155149 CA789714 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl280a12 DC117558 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3377744 BE190019 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6940821 CD099632 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6881208 CB208390 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3548062 BF611976 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26